KEGG   Vibrio fluvialis: AL536_08550
Entry
AL536_08550       CDS       T04379                                 
Name
(GenBank) GGDEF domain-containing protein
  KO
K20965  c-di-GMP phosphodiesterase [EC:3.1.4.52]
Organism
vfl  Vibrio fluvialis
Pathway
vfl05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vfl00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    AL536_08550
Enzymes [BR:vfl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.52  cyclic-guanylate-specific phosphodiesterase
     AL536_08550
SSDB
Motif
Pfam: EAL GGDEF PAS_4 PAS_8 PAS_9 PAS
Other DBs
NCBI-ProteinID: AMF96088
UniProt: A0AAX2LQ56
LinkDB
Position
2:complement(205397..207442)
AA seq 681 aa
MPSQNIQHWFAKITSNSPFFFALLNDQHQYVLVNERYCDIAGLPADDLIGMNDTQVLGEH
FYQHLQPYYSRAFNGETLEAEVTLHELDLETSLHFSLSPILNDNQVEYVVFHAIDTSEKQ
ILIRSLEESENKFSTLTTLLPDGLLLVEDDCIISANPSSARLLGFDDTSDLLGEELSRLF
IDEKTKAVFTTPIGLLLSEAPLVCLTGPRCGFERKVQLNAGTTRVLGSNSQLILIQDASQ
ATKQLSATTQTDMHIDTLTGLYNRLGFTKRLEQLIQNDTPLVMLYLDIDNFKNINDSLGH
HIGDKVIKEVSSRLKRLLPPQAVLGHLGGDEFGLILPEPEHNRSAEMLAERIISLINQPF
DLHHFSKRLACSIGSVRYPGDGNDARVLLQNADTAMYEAKDRGRNRLIKFNDQMNKEARM
RLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPGAFIPVAEK
AGLIEHLGRVVMRDVFATVKRWKQQGILPGRVAINISPEQFGNPQLIDYLEKLLRTTALD
PNCITFELTESAMMSDSDHTLQMLNAIKKLGFSLSIDDFGTGYSSLAYLARFPIDELKID
RAFITDIDTLPKQVTVIENIINLGKSLNLTVVAEGVETQQQATLLSNLNCHSIQGFHFYR
PQPKHEVEELFSQHRRHRKSL
NT seq 2046 nt   +upstreamnt  +downstreamnt
atgccctcgcaaaatatacagcactggtttgcaaaaattacgtcgaatagtccgttcttt
tttgcactgcttaatgaccaacatcagtatgttctggtcaatgagcgctattgcgatatc
gccggccttcctgctgacgacttgattggtatgaacgacactcaggttttgggtgaacac
ttctaccagcatctccaaccgtattactctcgtgcgtttaacggagaaactctcgaagcg
gaagtgacgctgcatgaactcgatctagagaccagcctgcacttttcgctgtccccgata
ctcaacgacaatcaagttgaatatgtggtgtttcacgccatagacacctccgaaaaacag
atcctaatccgctcgctggaagagtcggagaacaagttctcgaccctgactactctgctg
ccggatggcttactgttggtggaagacgactgcatcatttctgccaacccatcatccgct
cgtttgctcggttttgatgacacgtccgatcttctcggtgaagagctgtcacgcctgttt
attgatgagaaaaccaaagccgtatttactacgccaatcgggctgctgttgtctgaagcc
cctctggtttgcctcacaggtccgcgctgcggctttgagcgtaaagttcagctgaacgct
ggcactactcgtgttctgggcagcaattctcaactgatcctgattcaggatgcgtcgcag
gcgactaagcagctgtccgcgacgacccaaacggatatgcatatcgataccttaaccggt
ttgtataaccgtttgggctttaccaaacgtctggaacaactgattcagaacgatactccg
ctggtaatgctctacctcgacattgataacttcaagaatatcaatgactcgctggggcat
cacatcggcgacaaagtcattaaagaagtctcttcacgccttaaacgtctgctgccgcca
caagcggtgttgggccacctcggcggcgatgaattcggtttgatcctgccagagcccgaa
cataaccgttcggcggaaatgctggcggagcgcattatttcgctcatcaaccaaccgttc
gatctgcaccacttcagtaaacgtctcgcctgttctattggcagcgtccgctacccgggc
gacggcaatgatgcacgcgtgttgctgcaaaacgccgacaccgcgatgtacgaagccaaa
gaccgcggacgtaaccgtctgatcaagttcaatgatcaaatgaataaagaagcgcgcatg
cgcttgtggctggaaattgaactgcaaaaggcactgcagcaaaatggcctcgaagtgtgg
taccaaccgaaagtgaacgcgcgtgatttcagtatcaacggcgccgaagctctggtgcgc
tggaaacacccggttgaaggctatatcagcccgggggccttcattccggtggcggaaaaa
gcaggcttgattgaacatcttggccgcgtggtgatgcgcgatgtgtttgcgaccgtcaaa
cgctggaaacagcaaggtattctgccaggccgtgtggcgatcaatatttcgcccgagcag
tttggcaacccacaactgattgattaccttgagaagctgttgcgtaccaccgctttggat
ccaaactgcatcacctttgagctgactgagagcgcaatgatgagcgacagtgatcatacg
ctgcaaatgctcaatgccatcaaaaaactggggttctcgctgtcaattgacgacttcggt
acaggctattcatcgctcgcttatctggcccgattcccgattgatgagctgaaaatagac
cgcgcatttatcaccgacatcgacacactgcccaagcaggtcacggtgattgaaaacatc
atcaatttgggtaaatcactcaatctgaccgtagtggcagaaggggttgaaacccaacag
caagcgacactactttccaacctgaactgccattccattcagggtttccatttctatcgg
cctcaaccaaagcacgaagtggaagagctgttttcgcagcatcgacgccaccgtaaatca
ctctaa

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