Vibrio fluvialis: AL536_09205
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Entry
AL536_09205 CDS
T04379
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vfl
Vibrio fluvialis
Pathway
vfl03030
DNA replication
vfl03430
Mismatch repair
vfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AL536_09205
03430 Mismatch repair
AL536_09205
03440 Homologous recombination
AL536_09205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vfl03032
]
AL536_09205
03400 DNA repair and recombination proteins [BR:
vfl03400
]
AL536_09205
Enzymes [BR:
vfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AL536_09205
DNA replication proteins [BR:
vfl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AL536_09205
DNA repair and recombination proteins [BR:
vfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AL536_09205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AMF93704
UniProt:
A0A109X1F7
LinkDB
All DBs
Position
2:348438..351917
Genome browser
AA seq
1159 aa
AA seq
DB search
MSDPKFIHLRIHSDFSMVDGLSKVPPLVKKVAAMGMPAMALTDFTNLCGLVKFYGTAHGC
GIKPIVGADFSVRSDEFGDELTRITVLAKDNVGYKNLTLLISDAYLRGHVQHQPVIDKEW
LLTYAEGLIILSGGKNGEIGRALLKGNQALVEKCVEFYQTHFADNFYLELVRTGRADEES
YLHFALELAEQAELPVVATNDVVFIDPDQFDAHEIRVAIHDGFTLEDPRRPKNYSPQQYL
RSEEEMCELFADIPEALENSVEIAKRCNVTVRLGEYFLPAFPTEGMAETEYLVKKSREGL
EDRLEFLFPDPAVRAERRPAYDERLEIELQVINQMGFPGYFLIVMEFIQWSKDNDIPVGP
GRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDKRDQVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPFGFVDRISKMIPPDPGMTLEKAFKAEPA
LQELYDADEEVKELIDMCRILEGCTRNAGKHAGGVVISPTAITDFAPIYCDSEGHHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALGLINPRREKAGEPPVRIESIPLADPASFRVL
QNSETTAVFQLESRGMKELIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDEKWQHESLKEILEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQREVFQSGAENNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPA
EFMAAVMTADMDNTEKVVGLVDECMRMGLKVLPPDINSGLYRFNVDDSGAIVYGIGAIKG
VGEGPIEVILEARNKGGYFKDLFDFCARIDIKKVNKRVIEKLILAGALDRLGPHRAAMMA
SLDDAVKAASQHHQAEAFGQADMFGVLTDAPEEVEQKYIQVPEWPEKVWLEGERETLGLY
LTGHPINAYLKELNKYTSCRLNEATPTRRDQSLTVAGLVIAARVMTTKRGNRIGLMTLDD
RSGRMEVMLFSDALDRYAELLEKDKILVISGQVSFDDFNGGLKMSAREVMDLGSAREKYA
RGLSISIEQSQIDEQFFERFSQILEPHRAGTVPVNVYYQRPDARARLTLGTEWRVTPSDT
LLDELKQLLGNDQVELEFN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatccaaagttcatccacttacgcattcacagtgatttctccatggttgatggc
ctgtcaaaagtgccgccactggtgaagaaagtggccgcaatgggcatgccggcaatggct
ctgaccgactttaccaacctgtgtggcttggtgaaattttatggcacagcgcatggttgt
ggtatcaagccgatcgttggtgctgacttttctgtacgctccgatgaatttggtgatgaa
ctgactcgtatcaccgtactggccaaagataacgtcgggtacaaaaacctgacgttactg
atttccgatgcctacctgcgcggacacgtgcaacatcagccagtaatcgataaagagtgg
ctgctcacatacgccgaaggactgattattctttccggcggtaaaaatggtgaaattggc
cgtgcgctgctcaaaggcaaccaagccctagtagagaagtgcgtcgagttttatcagacc
cattttgctgacaacttctatctggaattggtgcgaaccgggcgtgcggacgaagagagc
tatcttcactttgcgttggagcttgcggaacaggcagaactgcctgtggtggcaaccaac
gatgtggtctttatcgaccctgaccagtttgatgcgcacgaaatccgagtcgccatccac
gatggctttaccttagaagatccccgccgtccgaaaaactacagcccgcaacagtacctt
cgcagcgaagaggaaatgtgcgagctgtttgccgacattccggaagcgctggaaaacagc
gttgaaatcgctaagcgttgtaacgtcacggtccgtttgggggagtacttcctgcctgcg
ttcccgaccgaaggcatggctgaaaccgaatacctggtgaaaaaatcgcgcgaaggtctg
gaagatcgtctggagttcctgttcccagatccggctgttcgcgcggaacgccgtccggca
tacgatgaacgtctggagatcgaacttcaggtaatcaaccagatgggcttccccggttac
ttcctgatcgtaatggagttcatccagtggtcgaaagacaatgatattccggtggggcca
gggcgaggctctggcgcgggttcgctggtggcgtacgcgctgaaaatcaccgaccttgat
ccgctggaatatgatctgctattcgaacgtttccttaacccggaacgggtatcgatgccc
gatttcgacgtcgacttctgcatggataaacgcgatcaggtgattgatcacgttgctgaa
atgtatggccgcgatgcggtatcgcagatcatcaccttcggtaccatggcggcgaaagcc
gttatccgtgatgtgggccgagtgcttggccatccgtttggttttgtggatcgcatttcg
aaaatgattccgccggatccgggcatgacgctggaaaaagcattcaaagcggagccggcc
ctgcaagagctttacgacgcagacgaagaagttaaagaactgatcgatatgtgtcgcatt
ctggaagggtgtactcgaaacgcgggtaaacacgcgggtggtgtggtgatctcgccaacg
gccatcaccgactttgcgccgatctattgtgactcggaaggtcaccatccggttacccaa
ttcgacaagaacgacgtcgaatatgctggcttagtgaagtttgacttccttggtctgcgt
acactcaccattattgactgggcgctgggtttgattaacccacgccgtgaaaaagcgggt
gaaccgccagtgcgaatcgaatcgattccgctcgcggatccggcctcattccgcgtgctg
caaaattcggaaaccaccgcggtattccagcttgaatcgcgcggcatgaaagagctgatc
aaacgcctgcagccagactgttttgaagacatcatcgcactggtggccctgttccgtccg
ggccctctacaatcaggtatggtggacaactttatcgaccgtaaacacggtcgtgaagcg
atttcttacccggatgaaaagtggcagcacgagtcactgaaagagattctggagccaacc
tacggcatcatcctgtatcaggaacaggtcatgcagattgctcaggtactggcaggctat
acgcttggtggtgcggacatgctgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gccaagcagcgcgaggtgtttcagtccggtgccgaaaacaacggtgttgacggcgaactg
gcaatgaaaatcttcgatctggtagagaaatttgctggatacggctttaacaaatcgcac
tcagcagcctatgctttagtatcgtaccaaacgctgtggctgaaaacgcactatccggct
gagttcatggcggcggtaatgaccgccgatatggataacaccgagaaagtggtgggcctg
gttgatgaatgcatgcgcatggggctgaaggtattgccgccggatatcaattcggggctg
taccgctttaatgtcgacgattccggcgcaattgtgtacggtatcggtgcgattaaaggg
gtaggtgaaggcccgattgaagtgatcctcgaagcgcgcaacaagggcggttactttaaa
gatttgtttgatttctgtgcacgcattgacattaagaaggtcaacaaacgtgtgatagaa
aaattgattctggctggtgcactggaccgtttggggccgcatcgtgctgcaatgatggct
tcgctggatgatgcggtgaaagcggcaagccagcaccatcaggcggaagcgtttggtcag
gcagacatgtttggtgtgctcactgacgcaccggaagaagttgaacagaaatacattcag
gttcctgaatggccggagaaagtctggctggaaggggagcgggagacgctcggactttat
ttgaccgggcatcccattaatgcctacctgaaggaactgaataagtacaccagttgtcga
ttgaatgaagcgacgccgacacgtcgcgatcagtcgttgacggtggctggtctggtgatt
gcagcgcgggtgatgaccaccaagcgcggcaaccgtatcgggttgatgacgcttgacgat
cgcagtggccgaatggaagtcatgctgttctccgatgcgctggatcggtatgcagaattg
ttagaaaaagataaaattctggtgatttccggacaggtcagctttgatgacttcaatggt
ggccttaaaatgtcggcgcgcgaagtcatggacttgggcagcgcgcgtgaaaaatatgcc
cgaggcttatctatctcgattgaacaatcgcagattgatgagcagttttttgagcgcttt
agtcagatcttagagcctcaccgagcagggactgtccctgtcaatgtatactaccagcgc
cctgatgcgcgagcacgtctgacgttaggcactgaatggcgtgtgactccaagcgataca
ttgttagacgaattaaaacagttacttggcaacgaccaggtagaactcgaatttaactaa
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