Vibrio fluvialis: AL536_09300
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Entry
AL536_09300 CDS
T04379
Name
(GenBank) 23S rRNA pseudouridine(2604) synthase RluF
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
vfl
Vibrio fluvialis
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vfl03009
]
AL536_09300
Enzymes [BR:
vfl01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
AL536_09300
Ribosome biogenesis [BR:
vfl03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
AL536_09300
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AMF93720
UniProt:
A0AAX2LKJ8
LinkDB
All DBs
Position
2:complement(369656..370681)
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AA seq
341 aa
AA seq
DB search
MSQSTEKRLNKYISETGFCSRREADKLIEQGRVTINGQLPEMGTKVTDNDEVCIDDKPVR
SKEKPVYIALNKPTGITCTTERDIPGNIVDFIGHHKRIFPIGRLDKPSDGLIFLTNDGDI
VNKILRAGNNHEKEYVVRVDKPVTPDFIKQMSSGVNILDTVTLPCKVTQETKFSFRIVLT
QGLNRQIRRMCEALGYEVFKLRRVRIMNISLDGIPNGKWRYLTDAEVAEILAMCEDSSGT
EEASRVDSKGARIRKATDAKLFDSREENQTSKARRNPKTFRGHNADEFRHAPNSKKGKGR
TDRSEHSRTERKPKTFVSHAAGKPNGKPAADRKGGTLSLKK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaatcaaccgaaaaacgtttgaacaaatacatcagtgaaactggattttgttct
cgccgcgaagcagacaagctgatcgaacaaggtcgcgtgaccattaacggccagttacca
gagatgggcaccaaagtgaccgataatgacgaggtgtgcatcgacgataaacctgtgcgc
agcaaagaaaagccagtctatattgcactgaataaacccaccggtattacctgtaccacg
gaacgtgacattccgggcaacatcgtggatttcatcggtcaccacaaacgtatttttccc
attgggcgtctggataaaccatcagatggcctgatttttctcaccaatgatggcgacatt
gtcaacaagatcctgcgcgccggcaataaccacgaaaaagagtacgtggtgcgtgttgat
aaacccgtgacaccagactttatcaaacagatgtcttccggagtcaacattctcgacact
gtaactctgccatgtaaagtgacgcaggaaaccaaattctcatttcgcatcgtactgact
cagggtctcaaccgtcagattcgtcgtatgtgtgaagcactgggttacgaagtcttcaag
ctgcgccgtgtacgcatcatgaacatttcactcgatgggattccaaacggtaagtggcgc
tatctgaccgacgcagaagtcgcagaaattctggcaatgtgtgaagattcaagcggtacg
gaagaggcatcacgcgttgacagcaagggcgcacgtattcgcaaagcgaccgatgccaag
ctgtttgacagccgtgaagagaaccaaacctcaaaagcacgtcgtaacccgaaaactttc
cgcggccacaatgctgacgaatttcgtcatgcgccgaattccaagaaaggcaaagggcgc
actgatcgttccgaacacagccgcactgagcgaaaaccaaagacatttgtttctcatgcc
gcgggcaaaccgaacggtaaacctgctgccgatcgtaaaggcggcacactgagcctgaag
aaataa
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