Vibrio fluvialis: AL536_10125
Help
Entry
AL536_10125 CDS
T04379
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
vfl
Vibrio fluvialis
Pathway
vfl02020
Two-component system
vfl02040
Flagellar assembly
vfl05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AL536_10125
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
AL536_10125
09142 Cell motility
02040 Flagellar assembly
AL536_10125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vfl03021
]
AL536_10125
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vfl02035
]
AL536_10125
Transcription machinery [BR:
vfl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AL536_10125
Bacterial motility proteins [BR:
vfl02035
]
Flagellar system
Flagellar assembly proteins
Stator
AL536_10125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_10
UPF0122
GerE
Rv2175c_wHTH
MarR_2
UPF0175
HTH_24
KORA
PhyR_sigma-like
Exo70_N
HTH_28
MarR
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
AMF93858
UniProt:
A0AAX2LPE9
LinkDB
All DBs
Position
2:524280..525014
Genome browser
AA seq
244 aa
AA seq
DB search
MNKALTYDQYGNINSQKLFLEKYSVLVKRIAHHLIGRLPPSVLIEDLIQAGMVGLLEAQK
NYDGSKGASFETYAGIRIRGAMLDDIRRGDWVPRSVHKHNREISQAIAELEGILNRDPSD
TEVAKHLGMSLDQYHSVLTDINCSRIVGIEDLGVTDDAISPVDDDEDNSPFKGVADESFR
KALVESIKSLPEREALVLSLYYDEELNLKEIGEVLGVSESRVSQILSQAMQRLRTKLSSW
TQND
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagcgcttacttatgatcaatacggcaatatcaatagccagaaattgtttctg
gaaaaatattccgtattggttaagcgtatagctcatcacttaatcgggcgtttacctcct
agtgtactcattgaagatttaatacaagccggcatggtcggcttacttgaagcgcaaaag
aactacgacggaagtaaaggtgcgagttttgaaacctacgctggtattcgtattcgaggc
gcgatgctcgacgatattcggcggggcgactgggtgccacgctcggtacacaaacataac
cgggaaatcagtcaggcaattgcagaactggaagggatcctaaatcgtgacccgtccgat
acagaagtcgcaaaacacctgggtatgtcgttagatcaataccatagcgtgttaaccgac
ataaactgttcgcgaattgtcggaattgaagatctgggagtgacggatgacgccatttcg
cctgtggacgatgatgaagacaactctcctttcaaaggggttgccgacgaatcgttccgt
aaagcattggttgagtcaataaaatcgcttcctgagcgtgaagccttagtactttcgctc
tattatgatgaagaactaaacttgaaagaaattggggaagtacttggcgtgagtgagtcc
cgcgtgagccaaatactgagccaagcaatgcaacgtctgcgaaccaagttgagttcctgg
acacaaaacgactaa
DBGET
integrated database retrieval system
