Vibrio fluvialis: AL536_12735
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Entry
AL536_12735 CDS
T04379
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vfl
Vibrio fluvialis
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vfl03032
]
AL536_12735
03400 DNA repair and recombination proteins [BR:
vfl03400
]
AL536_12735
Enzymes [BR:
vfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AL536_12735
DNA replication proteins [BR:
vfl03032
]
Prokaryotic type
DNA Topoisomerases
AL536_12735
DNA repair and recombination proteins [BR:
vfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AL536_12735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
CMV_1a
Motif
Other DBs
NCBI-ProteinID:
AMF94342
UniProt:
A0AAX2LN22
LinkDB
All DBs
Position
2:1091556..1094270
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AA seq
904 aa
AA seq
DB search
MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLEKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT
NIPPHNLTEVVDGCLAYIDNENITIDELMDYIPGPDFPTAAMISGRKGIIDAYKTGRGKI
YMRSKAEIEADKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREV
VTRRTIFELRKARERAHILEGLALALANIDDIIDLIRKAPTPAEAKAGLIARGWDLGNVA
AMLERAGTDAARPEWLEPQYGIRDGQYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKQL
LEEIAELMHILASTERLMEVIREELVTVRDSYGDARRTEITAASHDIDLEELIAREDVVV
TLSHEGYVKYQLLSDYEAQRRGGKGKSATRMKDEDYIERLLVANTHDNILCFSTRGKTYR
MKVYQLPLASRTARGKPIVNLLPLEENERITAILPVTEFSDDKFIFMATGDGTVKKTSLD
QFANVRSNGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKESEETTVVDENGQP
VLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKTDGDVLTVTENGYGKRT
SLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVDEGDEFMMITNAGTLVRTRVAEVSHVG
RNTQGVTLIRTAEDEQVVGLQRIEEIEESEFLEEEGSEIVNEGSEVPEASSETPETSSES
DTEE
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctagctaaagagatcacgcccgtaaacattgaagatgagctacgaggttca
tacctagactacgcgatgtcagttatcgtgggtcgtgctcttccagatgtgcgtgatggc
ctaaaaccagttcaccgtcgcgtgctgttcgcgatgaacgtactgggtaacgattggaat
aaaccatataaaaaatctgcccgtgtggtaggtgacgtaatcggtaaatatcacccgcac
ggtgatagtgcggtatacgatacgattgtacgtatggcgcagccgttctcgcttcgctac
atgctggtcgatggtcaaggtaactttggctcgatcgacggtgactccgcggcggcaatg
cgttacaccgaagtacgtatggcaaaaattgcccatgagttactggcggaccttgaaaaa
gaaaccgtggattacgtaccgaactatgacggtactgaacagatccctgcggttcttcct
accaaaattcctaacctgctggttaacggtgcctctggtatcgcagtcggtatggcaacc
aacattccaccgcataacttgacggaagtggttgacggttgcttggcgtacatcgacaac
gaaaacatcacgattgatgagttgatggattacattccgggcccggatttcccaacggct
gccatgatcagtggccgtaaaggcatcatcgatgcttacaaaaccggccgcggcaagatt
tacatgcgttcaaaagctgaaattgaggcggataagaacggtaaagaaaccatcatcgtg
accgaaattccttatcaggtgaacaaagcccgcctgatcgagaagattgcggaactggtt
aaagacaagaaagttgaaggcatcagtgcactgcgcgacgagtcagataaagacggtatg
cgcattgttatcgaatgtaagcgcgatgcagtaggcgaagtggttctgaacaacctctac
gcaaacactcagcttcagacgactttcggtatcaacatggtagcgctggacaatggtcag
cctaaactgtttaacctgaaagaaatgctgaagtgcttcgtcgatcaccgccgtgaagtg
gtgactcgtcgtacaattttcgaactgcgtaaagctcgtgaacgtgctcatatccttgaa
ggtttggcactggcactggccaacatcgatgacatcatcgatctgatccgtaaagcgcca
actccggctgaagcgaaagctggcctgattgcgcgtggttgggatttgggtaatgtggca
gcgatgcttgagcgtgctggcaccgatgctgctcgtccagagtggcttgagcctcaatac
ggtattcgcgacggtcagtacttcctgactgagcaacaagcgcaagctattctggatctg
cgtctgcacaagctgaccggtctggaacacgagaagattcttgacgaatacaaacagctt
ctggaagagatcgctgaactgatgcacattctggcaagcacagaacgtctgatggaagtg
attcgtgaagagctggttactgtacgtgatagttacggtgacgctcgtcgcactgaaatt
actgcggcaagccatgatatcgatctggaagagctgatcgcacgtgaagatgttgtggta
acactgtctcacgaaggttacgtgaaataccagttactgagcgattacgaagctcagcgt
cgtggtggtaaaggtaagagtgcgactcgcatgaaagatgaagactatattgaacgtctt
ctggttgcgaacacgcacgataatatcctgtgcttctcgactcgtggtaagacctaccgt
atgaaagtttaccaattgccattagcaagccgtaccgctcgtggtaagccgattgtgaac
ctgcttccgttggaagaaaacgagcgcatcacggcgattctgccagtgaccgagttcagt
gacgacaagttcatatttatggcaaccggcgacggtactgtgaagaaaacgtctctggat
cagttcgcaaacgttcgttctaacggtctgattgcgttgaacctgcgtgacgaagactcg
ctgatcggtgtagatatcactgatggcgaaagcgaaattatgctgttctctaaattcggc
aaagtagttcgcttcaaagaatcagaagaaactacagttgtggatgaaaatggtcaacct
gtactggatgaaaatggccagccagagatcaagttcaaaggcgtaagacctatgggtcgt
actgcagctggtgttcgaggtatgaaactggctgatggcgaccaagtggtatcgctaatc
gtaccgaagaccgatggtgatgtactcaccgtaacagaaaatggttatggtaagcgcacc
agcttgtctgaatacccaacgaagggccgtggtactcagggcgtggtttcgatcaaagtc
tctgagcgtaacggcagcgtagtgggtgcggttcaggttgacgaaggtgatgagttcatg
atgatcaccaatgcaggcacactggtacgtactcgtgtggctgaagttagccacgttggt
cgtaacacccaaggtgtaacgctaatccgtactgcagaagatgagcaagtagttggtttg
cagcgtatcgaagagattgaagaatctgaattcttagaagaggaaggttcggaaatcgta
aacgaaggcagtgaagtaccagaagcatcctctgaaacaccagagacatcatctgaaagt
gacacagaagaataa
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