KEGG   Vibrio fluvialis: AL536_13540
Entry
AL536_13540       CDS       T04379                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vfl  Vibrio fluvialis
Pathway
vfl03030  DNA replication
vfl03430  Mismatch repair
vfl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vfl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AL536_13540
   03430 Mismatch repair
    AL536_13540
   03440 Homologous recombination
    AL536_13540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vfl03032]
    AL536_13540
   03400 DNA repair and recombination proteins [BR:vfl03400]
    AL536_13540
Enzymes [BR:vfl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     AL536_13540
DNA replication proteins [BR:vfl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     AL536_13540
DNA repair and recombination proteins [BR:vfl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     AL536_13540
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: AMF94489
UniProt: A0AAX2LRC9
LinkDB
Position
2:1264981..1265544
AA seq 187 aa
MSIHALPLSDAVILDTETTGLDSSARIVEISLIDAESGLTLYSGLVNPMIQIPAEATAIH
GITNEDVADKPTFDVVWNEIKDFLFEQHVIVYNFDYDYRLIKQSLSDFDYPLANLIHFFG
GGLCAMAWYAEFYGDWNDYHECYKWQRLTAACAQQNIDVSDLTAHRALADCEMTRRLIHA
VNAKIKG
NT seq 564 nt   +upstreamnt  +downstreamnt
atgtctattcacgctttacctctatcagatgctgtcattctcgacacggaaactacgggc
ttagattcgagtgctcgtattgttgaaatttcactgattgatgctgagtccggtctaact
ctctacagcggtctggtgaatcccatgattcagattcccgctgaggctacggctattcac
ggcatcactaatgaagatgttgcagacaagcccacgtttgatgtggtttggaatgaaatc
aaagacttcctttttgaacaacacgtcatcgtttacaacttcgattacgactaccgactc
atcaaacaatcgctctcagacttcgattacccattggcaaatttaattcatttttttggt
ggcggtctgtgtgcaatggcctggtatgcggagttttatggcgattggaatgattaccat
gaatgctacaaatggcaacgtttgaccgctgcctgtgcacaacaaaatatcgatgtgtct
gatctaaccgctcaccgcgctttggccgattgcgaaatgactcgccgccttattcatgct
gttaacgcaaagattaagggctga

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