KEGG   Vibrio fluvialis: AL536_15725
Entry
AL536_15725       CDS       T04379                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
vfl  Vibrio fluvialis
Brite
KEGG Orthology (KO) [BR:vfl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vfl03016]
    AL536_15725 (rnd)
Enzymes [BR:vfl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     AL536_15725 (rnd)
Transfer RNA biogenesis [BR:vfl03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    AL536_15725 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNAseD_HRDC_C HRDC SRPRB
Other DBs
NCBI-ProteinID: AMF94893
UniProt: A0AAX2LQK6
LinkDB
Position
2:complement(1747667..1748782)
AA seq 371 aa
MNYQIIDQLNDLERVCALARDADVVMLDTEFVRTRTFYPQLGLIQLFDGENLSLIDPLAL
DEMSPFVELMQDTSVLKVLHACGEDIEVFKTSFGCVPFPMVDTQIMAAFLGYGLSTGFAS
LANDLLNVELDKSESRTDWLARPLSQKQLEYAAADVFYLMPMYEQLLEKVIQAGWWEAAQ
QESELQVEKRTRTSNPELAYLDIKGAWQLKPKELAILKPLATWRYQEAVNRDLALNFVIR
ENDLLTIARLALRSPKRMEEEGIDPHAIRRHSTKMINIVKAAQQTPPEQYPEKIVPLMDY
PGYKQLFKKLKDEVKNVSQSSGLATEFLASKKQLNQLLNWVWNKDKDPEKLPDVMQGWRL
PLLGEKLEKLV
NT seq 1116 nt   +upstreamnt  +downstreamnt
gtgaattatcagataattgatcaactcaacgatttagaacgtgtgtgtgctctggcgcga
gacgcagacgttgtcatgctggacaccgagtttgtccgcacccgtaccttctatccgcaa
ctgggcctgattcagctgtttgacggtgaaaacctgtcgctgatcgacccgttggcgctc
gatgagatgtcaccgtttgtcgagctgatgcaagacacttcggtactcaaagtgctgcac
gcgtgcggcgaagatatcgaagtatttaagaccagctttggttgtgtgccgttcccaatg
gtggatacgcaaattatggcagcgtttcttggttacggcctgtctacaggctttgcttcg
ctggccaatgatctgctgaatgtggaattggataaaagcgagtcgcgcaccgactggttg
gcgcgccccctgtcgcagaagcagcttgaatacgccgcagcggatgtgttttatctgatg
ccaatgtacgaacagttgctggagaaagtgattcaggcaggctggtgggaagcggcgcag
caagaatctgaactgcaagtggaaaagcgtacccgcacttccaacccagagctggcgtac
cttgatatcaaaggagcgtggcagctgaaaccgaaggaactggcgatacttaaacctctc
gcaacctggcgttatcaggaagcggtgaaccgcgatctggcacttaatttcgtcattcgt
gaaaacgatctgctgaccatcgctcgtctggctctgcgtagtccgaaacgcatggaagaa
gaaggcatcgatccgcatgcgattcgtcgtcacagcaccaagatgatcaacatcgttaaa
gccgcgcagcagaccccgccagagcagtacccggagaaaatcgtgccgctgatggactat
ccgggttacaaacagctgtttaaaaagctgaaagatgaagtgaaaaatgtctcgcaatca
tccggattggcgacggagtttctggcttccaagaagcagctcaaccaattgttgaactgg
gtatggaacaaagataaagatccggaaaaattgccggatgtgatgcaaggctggcgcctg
cctctactgggcgaaaagctggaaaaacttgtttaa

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