Vibrio fluvialis: AL536_15725
Help
Entry
AL536_15725 CDS
T04379
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
vfl
Vibrio fluvialis
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vfl03016
]
AL536_15725 (rnd)
Enzymes [BR:
vfl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AL536_15725 (rnd)
Transfer RNA biogenesis [BR:
vfl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AL536_15725 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
SRPRB
Motif
Other DBs
NCBI-ProteinID:
AMF94893
UniProt:
A0AAX2LQK6
LinkDB
All DBs
Position
2:complement(1747667..1748782)
Genome browser
AA seq
371 aa
AA seq
DB search
MNYQIIDQLNDLERVCALARDADVVMLDTEFVRTRTFYPQLGLIQLFDGENLSLIDPLAL
DEMSPFVELMQDTSVLKVLHACGEDIEVFKTSFGCVPFPMVDTQIMAAFLGYGLSTGFAS
LANDLLNVELDKSESRTDWLARPLSQKQLEYAAADVFYLMPMYEQLLEKVIQAGWWEAAQ
QESELQVEKRTRTSNPELAYLDIKGAWQLKPKELAILKPLATWRYQEAVNRDLALNFVIR
ENDLLTIARLALRSPKRMEEEGIDPHAIRRHSTKMINIVKAAQQTPPEQYPEKIVPLMDY
PGYKQLFKKLKDEVKNVSQSSGLATEFLASKKQLNQLLNWVWNKDKDPEKLPDVMQGWRL
PLLGEKLEKLV
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
gtgaattatcagataattgatcaactcaacgatttagaacgtgtgtgtgctctggcgcga
gacgcagacgttgtcatgctggacaccgagtttgtccgcacccgtaccttctatccgcaa
ctgggcctgattcagctgtttgacggtgaaaacctgtcgctgatcgacccgttggcgctc
gatgagatgtcaccgtttgtcgagctgatgcaagacacttcggtactcaaagtgctgcac
gcgtgcggcgaagatatcgaagtatttaagaccagctttggttgtgtgccgttcccaatg
gtggatacgcaaattatggcagcgtttcttggttacggcctgtctacaggctttgcttcg
ctggccaatgatctgctgaatgtggaattggataaaagcgagtcgcgcaccgactggttg
gcgcgccccctgtcgcagaagcagcttgaatacgccgcagcggatgtgttttatctgatg
ccaatgtacgaacagttgctggagaaagtgattcaggcaggctggtgggaagcggcgcag
caagaatctgaactgcaagtggaaaagcgtacccgcacttccaacccagagctggcgtac
cttgatatcaaaggagcgtggcagctgaaaccgaaggaactggcgatacttaaacctctc
gcaacctggcgttatcaggaagcggtgaaccgcgatctggcacttaatttcgtcattcgt
gaaaacgatctgctgaccatcgctcgtctggctctgcgtagtccgaaacgcatggaagaa
gaaggcatcgatccgcatgcgattcgtcgtcacagcaccaagatgatcaacatcgttaaa
gccgcgcagcagaccccgccagagcagtacccggagaaaatcgtgccgctgatggactat
ccgggttacaaacagctgtttaaaaagctgaaagatgaagtgaaaaatgtctcgcaatca
tccggattggcgacggagtttctggcttccaagaagcagctcaaccaattgttgaactgg
gtatggaacaaagataaagatccggaaaaattgccggatgtgatgcaaggctggcgcctg
cctctactgggcgaaaagctggaaaaacttgtttaa
DBGET
integrated database retrieval system