KEGG   Vibrio fluvialis: AL536_16015
Entry
AL536_16015       CDS       T04379                                 
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
vfl  Vibrio fluvialis
Pathway
vfl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vfl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    AL536_16015
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vfl03400]
    AL536_16015
DNA repair and recombination proteins [BR:vfl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AL536_16015
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      AL536_16015
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_22 UB2H UvrD-helicase
Other DBs
NCBI-ProteinID: AMF94948
UniProt: A0ABM5XPM9
LinkDB
Position
2:complement(1809583..1811613)
AA seq 676 aa
MSKAFELVSEYQPSGDQPEAIRQLLEGIDAGLAHQTLLGVTGSGKTFTLANVIAQAQRPT
ILLAPNKTLAAQLYGEMKGFFPNNAVEYFVSYYDYYQPEAYVPTTDTFIEKDAAVNSHIE
QMRLSATKALLERKDAIIVASVSAIYGLGDPDSYLKMMLHLRRGDVINQRDMLRRLAELQ
YSRNDVAFERGQFRVRGEVIDIFPAESDQDAVRVEMFDDEVECISIFDPLTGVIKQRDLP
RFTVYPKTHYVTPRERILDAIENIKTELASRRQYLLDNNKLLEEQRISQRTQFDIEMMNE
LGFCSGIENYSRYLSGRAEGEPPPTLFDYLPHDGLLVIDESHVTVPQIGAMYKGDRSRKE
TLVEYGFRLPSALDNRPLKFEEFEALAPQTIFVSATPGNYELEKSDGEIADQVVRPTGLL
DPELEVRPVATQVDDLLSEIRIRAVKDERVLVTTLTKRMAEDLTEYLHEHDVKVRYLHSD
IDTVERVEIIRDLRLGVFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNLQGKAILYADNITKSMKKAMDETSRRREKQQAYNEKMGIEPQALKRNVKDIMEL
GDITKSRKQRTSKVVPLAKVAEESASYDTMTPQQLEKEINRLEAQMYKHAQDLEFELAAE
KRDQLEKLRQQFIVNS
NT seq 2031 nt   +upstreamnt  +downstreamnt
atgagcaaagcatttgaattggtctccgagtatcaaccatccggcgatcagccagaggcg
attcgccaacttctggagggaattgatgccgggttggcccatcagacattacttggcgtg
acaggctcggggaagactttcactttagctaatgtgatcgcacaggctcagcgtccgacg
attctgctggctcccaataaaacgttggctgcacaattgtacggcgagatgaaaggcttc
tttcctaacaacgcggtagaatacttcgtctcttactacgattattaccagccagaggcg
tatgtaccgacgaccgatacctttattgagaaggatgccgcggtcaactcacacattgaa
cagatgcgtctgtcggcaaccaaagcgcttcttgagcgtaaagatgccatcattgtggct
tcggtgtctgcgatttatggtctgggcgatccggactcctacctgaaaatgatgctgcat
ctgcgccgcggagatgtgattaatcaacgggacatgctacgtcgcctggctgagctgcaa
tactcgcgcaatgatgtggcgtttgagcgcggtcagttccgagtgcgcggcgaggtgatt
gatatcttcccggctgaatcggatcaggatgccgtgcgcgtagaaatgtttgacgatgaa
gtggagtgtatcagcatttttgacccattaaccggggtgattaagcagcgtgatctgcca
cgttttaccgtttatccgaagacacactacgttacgccacgagagcgtattctcgatgcc
atcgaaaacatcaaaactgaactggcatcgcgacgtcagtatctgctcgacaacaacaag
ttactggaagaacagcgtatttctcagcgcacccaatttgatatcgaaatgatgaatgag
ttggggttctgttcagggatagaaaactattcccgttacctcagcggacgcgcggaaggc
gagccgccaccgaccctgtttgattacctgccacacgacggcctacttgtgatcgatgaa
tcgcacgtgaccgtgccgcagattggcgcaatgtataaaggtgaccgctcacgtaaagag
acgttggtcgagtatggttttcgtctgccttcggcattggataaccgaccactcaagttt
gaagagttcgaagctctggcaccgcaaaccatctttgtatccgcgactccgggtaactac
gaactggagaaatccgatggtgaaattgcggatcaggttgtgcgcccaactggtttgctc
gatcctgagcttgaagtccggcctgtcgcgactcaggtcgatgatctgctgtccgaaatt
cgcattcgcgcggtgaaagatgagcgggtgctggtgaccacgctgaccaaacggatggcc
gaagacttaactgaatacctgcacgaacacgatgtcaaagtacgttatctgcactcggat
attgataccgtggaacgggtagaaatcattcgtgacttacgcctcggtgtgtttgacgtg
ttagtgggtattaacttattgcgcgaaggtctcgacatgccggaagtctcgctggtggcg
attctggatgctgacaaagagggtttcctgcgctctgaacgttcattgattcagaccatt
ggccgcgccgctcgtaacctgcagggtaaagcgatcctgtacgcagacaacatcaccaag
tcgatgaaaaaagcgatggatgagaccagtcgtcgccgcgagaaacaacaagcgtacaac
gaaaaaatgggcattgagccacaagccttgaagcgcaacgtgaaagatatcatggagttg
ggtgacattaccaagtcgcgtaagcaacgtaccagcaaagttgtgcctttggcgaaggtt
gcagaagagtcagccagctacgatactatgacaccacagcagttggaaaaagagatcaac
agactcgaagctcagatgtacaaacatgcacaggatttggagtttgaactggctgcagaa
aaacgcgatcagcttgaaaagctgcgtcagcagttcattgttaatagctaa

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