Vibrio fluvialis: AL536_16475
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Entry
AL536_16475 CDS
T04379
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vfl
Vibrio fluvialis
Pathway
vfl00260
Glycine, serine and threonine metabolism
vfl00460
Cyanoamino acid metabolism
vfl00630
Glyoxylate and dicarboxylate metabolism
vfl00670
One carbon pool by folate
vfl00680
Methane metabolism
vfl01100
Metabolic pathways
vfl01110
Biosynthesis of secondary metabolites
vfl01120
Microbial metabolism in diverse environments
vfl01200
Carbon metabolism
vfl01230
Biosynthesis of amino acids
vfl01240
Biosynthesis of cofactors
vfl04981
Folate transport and metabolism
Module
vfl_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AL536_16475 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AL536_16475 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AL536_16475 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AL536_16475 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AL536_16475 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AL536_16475 (glyA)
Enzymes [BR:
vfl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AL536_16475 (glyA)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AMF95036
UniProt:
A0AAX2LPP0
LinkDB
All DBs
Position
2:complement(1907447..1908697)
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AA seq
416 aa
AA seq
DB search
MLKRDMNIADYDAELFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDKAESLAIDRACKLFGCEYANVQPHSGSQANSAVYMALLNPGDTVLGMS
LAHGGHLTHGSPVNFSGKHYNVIPYGIDEAGQINYDEMEALALEHKPKMIIGGFSAYSQI
VDWKRMREIADKVDAYLFVDMAHVAGLIAAGVYPTPIPYAHVVTTTTHKTLAGPRGGLIL
SNAGEEMYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEAMEPEFKAYQQRVVKNAKAMVAQ
FQERGYKIVSNGTENHLFLVDLIDKDITGKEADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGTPAITRRGFTEEDAKNLANWMCDVLDNINDQAVIEATKQKVLDICKRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagcgtgatatgaatatcgctgattacgatgcggagctattcgcagcaatccaa
gaagaaactcttcgccaagaggaacacattgagcttatcgcttcagaaaactacaccagc
ccacgtgtaatggaagcgcaaggttctcagctgacaaacaaatacgctgaaggttaccca
ggcaagcgttactacggcggctgtgagtacgtcgacaaagctgaatctctggcgattgac
cgtgcgtgtaaactgttcggctgtgaatacgcgaacgtacagccacactcaggttctcag
gcaaacagcgcggtgtacatggccctgctgaatcctggcgatacggttctgggtatgagc
ctggcacacggtggtcacctgactcacggttcacctgtgaacttctctggtaaacactac
aacgttattccttacggtatcgacgaagcgggccaaatcaactacgacgaaatggaagcg
ctggcacttgagcacaaacctaagatgatcatcggtggtttctcagcgtactcgcaaatc
gttgactggaaacgcatgcgcgaaatcgcagataaagtcgacgcttacctgtttgttgat
atggcacacgttgcgggtctgattgcggcgggtgtttacccaacgccaatcccttacgca
cacgttgttacgacaacaacgcacaaaacactggctggtccacgtggcggtttgatcctg
tcaaacgctggcgaagagatgtacaaaaagctgaactcagcagtattccctggcggtcag
ggtggtcctctgatgcacgttatcgcgggtaaagcggtagcgttcaaagaagcgatggaa
cctgaattcaaagcttaccaacagcgcgttgtgaaaaatgcaaaagcgatggttgctcag
ttccaagagcgtggctacaagatcgtatcaaacggtactgaaaaccacctatttctggtt
gatctgatcgacaaagacatcacgggtaaagaagcggatgctgcgctgggtgcagcaaac
atcaccgtaaacaaaaactcagtgccaaacgatccacgtagcccatttgtgacttctggt
attcgtgtgggtacgccggctatcactcgtcgtggtttcactgaagaagacgcgaagaat
ctggcaaactggatgtgtgacgttctggacaacatcaatgaccaagcggtaattgaagcg
acgaaacagaaagttctggatatctgtaagcgcctgccagtttacgcataa
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