Vibrio fluvialis: AL536_17375
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Entry
AL536_17375 CDS
T04379
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
vfl
Vibrio fluvialis
Pathway
vfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AL536_17375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vfl03400
]
AL536_17375
Enzymes [BR:
vfl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AL536_17375
DNA repair and recombination proteins [BR:
vfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AL536_17375
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
SH3_13
AAA_11
NAT10_TcmA_helicase
Viral_helicase1
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
AAA_16
DEAD
TrwB_AAD_bind
AAA_28
UvrD_C
PhoH
MukB
T2SSE
NTPase_1
FtsK_SpoIIIE
CbiA
ResIII
NPHP3_N
AAA_7
SRP54
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
AMF95201
UniProt:
A0AAX2LQI8
LinkDB
All DBs
Position
2:complement(2105220..2107373)
Genome browser
AA seq
717 aa
AA seq
DB search
MMDVRLDFAQVSAQLKQLAAQGALRQLDYQFAHFLAQQTDAGTLSDHERAALMLAAAAVS
AELGRGHICLPLVDEQGNRVELASKVGVYGEAALPLNQLWLSVDWAALVARTPLIGVRGE
AVPLMFDGQRLYLHRYWHYEVTLAARLQSFGTPMILKPMAVQNLRQRLDTLFARDYRFLQ
QALQRKGAALALNQVARQRLVCDLLDVVDESGLDWEAIDGVLQQAKRSEDFAPLDTLVPQ
AHCLNWQKVAAAIALTRRFAVISGGPGTGKTTTVTKLLAALISQAQQAQHTPTIKLVAPT
GKAAARLTESIGKAVASLAVEPELKALIPTESSTIHRLLGAIPDSAEFRHHAGNRLHLDV
LVVDEASMVDLPMMVKLVDALPDSARLILLGDKDQLASVEAGAVLGDICSFLYQGYSKEQ
SRLLSELTGFQSAALSPRHAEHRIADSLCMLQKSYRFDACSGIGQLAKAINSGQALWVDK
VWQEAFSDIQHFALSSEHYNQMLQSLVGAYSPYLALMATPLTPSQNMAEKARDALQAFGR
ARLLCAVREGDFGVSGLNYRIERALAARKKIKVQDEIWYAGRPVMVTRNDHGLGLYNGDI
GICLRDEQDEQQRLKVYFELPDGSVKAVLPSRVPQHETAYAMTIHKSQGSEFEFTVMILP
PEFSPILTRELIYTGITRAKKQLALYCDMGVLKRGIKLKTQRASGLVERLMDMGDDA
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgatggatgtccgtttggattttgcgcaggtgagcgcgcagttaaagcaactggcggcg
cagggcgcactgcgccagctcgattaccagtttgctcatttcctcgctcaacaaaccgac
gcggggacgctgagcgatcacgagcgcgcggcgttgatgttagccgctgcggcggtcagt
gccgaactggggcgcggtcatatctgtttgccgctggtcgatgagcagggcaaccgggtt
gaactggcgagtaaggtgggggtgtatggcgaggctgccctgccgctaaatcagctgtgg
ttgtctgtggattgggcggcactggtggcgcgcacgccgctgattggcgtacgcggtgaa
gcggtgccgctgatgtttgatggtcagcgcttgtacctgcatcgttattggcattatgaa
gtgaccttggcggcgcgtttgcagagctttgggacacctatgatcttaaagcctatggca
gtccaaaatcttcgccagcgactcgatacgttgtttgcccgcgactatcgttttttacag
caagccttgcagcgcaagggggcagcgttggcattgaatcaggtggcgcgtcaacgtttg
gtgtgcgacttacttgatgtggtcgacgagtccgggctcgattgggaagcgattgatggc
gtgttgcaacaggccaaacgcagcgaggatttcgcgccgctggataccttggtgccccaa
gcgcactgtctgaactggcagaaagtggcggccgcgattgccctgacgcgccgttttgcg
gtgatttccggtggtcccggtacgggcaaaacgaccaccgtgaccaaattgctggcggcg
ctgatcagtcaggcgcaacaagcgcagcacacgccgaccatcaaactggtggcaccgacg
ggtaaagcggccgcgcggctgaccgaatcgatcggtaaagcggtggcaagcttagccgta
gagcctgagctcaaagcgctgatccctaccgaatcgagcaccattcaccgcttgttggga
gcgattcccgacagcgccgagtttcgtcatcatgcaggcaatcgcctgcaccttgatgtg
ctggtggtcgatgaggcgtcgatggtcgatttgcccatgatggtcaaattggtcgatgcg
ctgccggacagtgcgcggctgatattactcggcgataaagatcagttggcgtcggtggaa
gcgggcgccgtgctgggcgatatctgctcgtttctttaccaaggttacagcaaagagcag
agccgtttgttgtctgagctgaccggctttcagtctgcggcgctcagcccgcgtcacgcc
gagcatcgcattgccgatagcttgtgcatgctgcaaaagagttaccggtttgatgcgtgc
tccggcattggtcagttggcgaaagccatcaacagtggtcaggccttgtgggtggataaa
gtatggcaggaagcatttagcgacatccaacactttgcgctcagcagcgagcactacaac
cagatgttgcaatctctggtgggcgcttattcgccgtatctggcattgatggcaacgccg
cttacgccgtcgcaaaatatggctgagaaagcgcgcgatgcgttgcaggcctttggccgc
gcgcgtttattgtgcgcggtgcgagaaggcgattttggtgtcagcggacttaactaccgc
attgagcgggcgctggctgcgcgcaagaaaattaaagtacaggatgaaatctggtatgcc
ggacgcccggtgatggtgacgcgcaacgatcatggtcttggcctgtacaacggtgatatc
gggatttgtctgcgcgatgagcaagatgagcagcagcgcctgaaagtttactttgaactg
cccgatggcagcgtcaaagcggtgttgcccagccgagtgccgcaacacgaaaccgcctat
gcgatgacgattcacaaatcgcagggcagtgaatttgagttcactgtgatgattctgccg
ccggaattcagcccgattttaacccgtgagttgatttacaccggcatcactcgcgccaag
aagcagctcgcgctgtattgcgatatgggagtgctcaaacgcggcattaaactcaaaacg
caacgcgcaagtggattggtggagcgtttgatggatatgggcgacgacgcctaa
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