Vibrio fluvialis: AL536_17385
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Entry
AL536_17385 CDS
T04379
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
vfl
Vibrio fluvialis
Pathway
vfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AL536_17385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vfl03400
]
AL536_17385
Enzymes [BR:
vfl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AL536_17385
DNA repair and recombination proteins [BR:
vfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AL536_17385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
DUF2199
Motif
Other DBs
NCBI-ProteinID:
AMF95203
UniProt:
A0AAX2LUV6
LinkDB
All DBs
Position
2:complement(2111293..2114814)
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AA seq
1173 aa
AA seq
DB search
MFTVYHSNKVDTLKILLVHLIKNDPLANPFEKEQILVQSPGMSQWLKMALAQELGVAANL
DFPLPATFIWEMFTQVLPNVPKRSAFNKEAMTWKLMELLPSQLDLDVFAPLRRYLQDDTD
QSKLYQLAEKIADIFDGYLVYRPDWIASWEAGESVAEIDGEHPWQPVLWKALYGYTLTQG
QSHYHRANLYQSFIDALAHIDLTYDEALRAALPKRLFIFGISSLPPRYMDALKALGEHID
VHLMFTNPCQHYWGDIRDRKYLARVESQRRKQLVLHPNAEAQTFTVEGEVSPLKGELDDY
AGDELHTAQAVGNSLLASMGKLGRDNLYLLAQSDNEEHELFIDVPRDSLLHQLQADILHL
EEHQDDTRLDSSAHKPALPHGDRSLTLHACHSPMREVEVLHDELLAMFDRDPELKPRDII
VMVADINAYSPYIQAVFGNAPGERFIPYSISDRTADQESPILNAFMQLVALPQSRCLASE
LLELLETPAMMARFALDASEFDTAKRWVEESGIRWGLNDATAQEFELPQTHQNTWQFGIA
RMLLGYAMPSSVGLFEAGGHAMAPYNEVQGMSAELAGKLAHFIDTISDYRQRLAQTQPIE
AWRELLSSLIDDCFSVDLDGEMALKSIRDTLAALKEQLADAGFDDAISPAIMGQYLHDKL
SGTRVSQRFLAGQVNFCTLMPMRSIPFNVVCLLGMNDGVYPRSMPPEGFDLMSGRTRPGD
RSRRDDDRYLFLEAMLSAQHTLYISYVGRSIQDNTERVPSVLVTELLEYCQQNYCLAGDE
ALPSDDSGERLIEQLQFTHAMVPFSPQAFLTDVGSYAKEWLPAALRQGTASGTFHRALDD
YLLDAVYPLELDLVELQRFWRLPVQYFFNRRLKVVFEPPLPVMEDDEPFALGGLASYQLR
DALLDGLLNAPSAQARDEVLTQFNKQQRAQGKLPVGAFGDLEFETNRVQAEELVEKIQFL
CQAPLDDLDVNLTFTALGQSRPVRLSGWLTRRYQSGLVRYRSGAIRSEDILAAWIDHLAA
AASGANLTTHVIGYDRKEGVVHQVLPPLSSHSSESAALAMAQLNELARLYYQGMTAPLAY
FPKTALAGVEAGFSRGQWVDDEEKSLKKMAETFNDGFMTSGEGNNHYIARLWPQWTDELA
HQVRVLASLVLQAPRLQLRDYADHISIEKASQA
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaccgtttaccactccaacaaagttgatacgctgaagattctgctggtgcatctg
attaaaaatgatccactggccaatccgtttgagaaagagcagattctggtgcaaagcccg
gggatgtcgcagtggctgaaaatggcgctagcacaggagctcggtgtcgctgccaatctc
gattttccactgccggcaaccttcatctgggagatgttcactcaggtgttgccgaacgtg
cccaaacgcagtgccttcaacaaagaagcgatgacctggaaactgatggaactgctgcca
tcgcagctggatctggatgtattcgcgccgctgcgccgctatctgcaagacgataccgac
cagtcgaagctctatcaactggcagaaaaaatcgccgatattttcgatggttacttggtg
tatcgccccgactggatcgccagttgggaagcgggggaaagcgtggctgaaatcgatggg
gagcacccgtggcagccggtgttgtggaaagcgctctacggctacacgctgacgcaaggc
caatcgcattatcaccgtgccaatctctaccaaagctttatcgacgccttagcgcacatc
gacctgacatacgatgaggcgctgcgcgctgcgctgccaaaacgcctgtttatctttggc
atctcgtcgctccccccccgttacatggacgcccttaaagcgcttggcgaacacattgac
gtgcatctgatgtttaccaacccatgtcagcattactggggcgatattcgcgaccgtaaa
tatctggcgcgggtggaaagtcagcgccgcaaacaattggttctccatcctaatgcggag
gcacaaaccttcacggtggagggggaagtctcgccactgaaaggcgagctggacgattac
gcgggcgatgagctgcacaccgcgcaagccgtcggcaacagcttgttggcctcgatgggc
aaactcgggcgcgataacctctatttgctggcgcaaagcgacaacgaagagcatgaactg
tttattgatgtgccgcgggattcgctgctgcatcagttgcaggccgacattctgcatctg
gaagagcatcaagacgacacgcggctggacagcagcgcgcacaaaccagcactgcctcac
ggcgatcgctcattgacgctgcatgcctgccacagcccgatgcgggaagtggaagtgctg
cacgacgaattgctggcgatgtttgaccgagatccggaactcaaaccgcgcgacattatt
gtgatggtggccgacatcaacgcctacagcccttatattcaggcggtgtttggtaacgcg
ccgggggaacgtttcattccttattcgatttccgaccgcaccgccgatcaggaaagtccg
attctcaatgcgtttatgcagttggtcgcgttgccgcaatcacgctgtctggcgtcggaa
ttgctggaacttctggaaacaccagcgatgatggcgcgctttgcgcttgatgcgagcgaa
tttgacaccgccaaacgctgggttgaagagtcgggcattcgctgggggctcaacgacgcg
accgcgcaagagtttgagctgccgcagacccatcagaacacctggcagttcggcatcgcc
cgcatgttgctgggctatgcgatgccgtcatcggttggcttgtttgaagcgggcggtcac
gccatggcaccgtacaacgaagtgcagggcatgagcgcggaactcgccggtaaactggcg
catttcatcgacaccatcagcgattaccgtcagcgactggcacaaacgcagcccattgag
gcgtggcgagagctgctgtcgtcgctgattgatgactgtttcagcgtcgatctggacggc
gagatggcactcaaatcgattcgcgacacgctcgcggcgctcaaagagcagctcgctgac
gctggattcgacgacgcgatatcgcccgccatcatggggcagtacctgcatgacaagctg
tctggaacgcgtgtcagtcagcgttttctcgccggtcaggtcaacttctgtaccctgatg
ccgatgcgttcgattccgtttaacgtcgtctgtctgcttgggatgaacgatggggtttac
ccgcgttccatgccgccggaagggtttgatttaatgagcggccgtacgcgtccgggcgat
cgctcgcgccgcgatgacgaccgttatctgttcctcgaagcgatgctttccgcgcagcac
accctgtacatcagttatgtgggccgctcgattcaggacaacaccgaacgcgtgccgtca
gtgctggtgaccgaattgctggaatattgccagcagaactattgcttggccggcgatgaa
gcactgccgagtgatgactctggcgagcgcctgattgaacagttgcagttcacccacgcc
atggtgcccttcagcccgcaagcgtttttgaccgatgtcggcagttacgctaaagagtgg
ctgcctgccgcgctgcgccaaggcaccgcgagtggcacgttccatcgcgcgttggatgat
tatctgctcgatgcggtttacccgctggaattggatctggtcgagctgcaacgtttttgg
cgcttgccggtgcaatatttcttcaatcgccgcctgaaagtggtgtttgagccgcctttg
ccggtgatggaagacgatgagccgttcgcgctcggtggccttgccagctatcagctgcgt
gacgcgctgttggacggcttgctcaatgcgccctcggcgcaggcgcgtgatgaggtgttg
acgcagttcaacaagcaacagcgcgcgcaaggtaagctgccggtcggcgcgtttggtgat
ctggagtttgaaaccaaccgcgtgcaagccgaagagctggtcgaaaaaatccagtttctc
tgtcaggcgccgctcgatgatctcgatgtcaacctgaccttcacggcgctcggccagtca
cgcccggtgcgtttgagcggctggctgacgcggcgttatcaatcggggctggtgcgttat
cgcagcggcgcgattcgatcggaagatattctggcggcgtggattgatcatctggcggcc
gcagcatcaggtgccaacctgaccacgcatgtgattggctacgatcgcaaagaaggcgtg
gtgcatcaggttctgcctccactcagtagtcattcaagtgaaagcgcggctctggcaatg
gcgcaactgaacgaattggcgcgactctattaccaaggcatgactgcgccgctggcctat
ttcccgaaaacagcgttggccggtgttgaagcgggattcagccgcgggcaatgggtcgac
gatgaagaaaaatcgctcaagaagatggccgagacattcaatgacggtttcatgaccagc
ggtgaaggcaacaaccattacatcgcgcgtttgtggccgcaatggacggacgaactggcg
catcaggtgcgtgtgttggcgagtttggtcttgcaggcaccgcgtttacagttgcgcgat
tacgccgaccacatctcaatcgagaaggccagtcaggcatga
DBGET
integrated database retrieval system
