Vibrio fluvialis: AL536_19395
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Entry
AL536_19395 CDS
T04379
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
vfl
Vibrio fluvialis
Pathway
vfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AL536_19395 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vfl03021
]
AL536_19395 (rho)
03019 Messenger RNA biogenesis [BR:
vfl03019
]
AL536_19395 (rho)
Transcription machinery [BR:
vfl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AL536_19395 (rho)
Messenger RNA biogenesis [BR:
vfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AL536_19395 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_22
AAA_25
OB_RNB
AAA
S1CSD-TOTE-2
DnaB_C
Motif
Other DBs
NCBI-ProteinID:
AMF95532
UniProt:
A0AAX2LRR9
LinkDB
All DBs
Position
2:complement(2531782..2533041)
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNRPVSDLVKLGESLGLENLARLRKQDIIFSILKAHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDSIAGKIRPPKEGERYFALLKVNTVN
DDKPDNARNKILFENLTPLHANERMVMERGNGSTEDITARVLDLAAPIGKGQRGLIVAPP
KAGKTMLLQNIAQSIASNHPECVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLNRKIAEKRVFPAIDF
NRSGTRREELLTKPDELQKMWILRKIVHPMGETDAMEFLIDKLAMTKTNDEFFDAMRRQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatctaacagaattgaagaacagacctgtgtctgatcttgtgaaacttggtgagagc
ctgggccttgaaaaccttgcgcgtctgagaaaacaagacattatcttctccatcctcaaa
gcacatgcaaaaagtggtgaagacatctttggtgacggggtcttggaaattcttcaagac
ggttttggtttcctacgcagtgcagacagttcatacctggctggtcctgacgacatctat
gtgtcaccgagccagattcgtcgctttaacctgcgcacgggtgactcgatcgccgggaaa
atccgtccgcctaaagaaggtgagcgttactttgcactgttaaaagtgaacacagttaac
gacgacaaaccagacaacgcccgcaataaaatccttttcgaaaacttaactcctctgcat
gccaacgaacgtatggtgatggaacgtggtaatggttctactgaagacattacggcgcga
gttctcgacctggcggcaccaattggtaaaggtcagcgtggtctgatcgttgctccgcca
aaagcgggtaaaaccatgctgctgcaaaacattgcacaaagtatcgccagcaaccaccct
gagtgtgtgttgatggttcttctgattgacgaacgtccggaagaagtgactgagatgcag
cgtttggtgaaaggtgaagtggttgcttcgactttcgatgagccggcatcacgtcacgtt
caagtggctgaaatggtgatcgagaaagcgaaacgtctggttgaacataagaaagatgtg
gtgatcctgctggattcgattactcgtctcgctcgtgcttacaacacggtcgtgccttca
tcaggtaaagtactgactggtggtgtggatgcgaacgcactgcatcgtcctaagcgcttc
tttggtgcggctcgtaatgttgaggaaggcggtagcctgacgatcatcgccactgcgctg
gtcgataccggttcgaagatggatgaagtcatttatgaagagttcaaaggtacaggtaac
atggaactgcacctgaaccgtaagattgctgaaaaacgtgttttcccagcgatcgacttc
aaccgcagtggtactcgtcgtgaagagctactgactaagccggatgaactgcagaagatg
tggattctacgtaagattgttcaccctatgggcgaaactgatgcgatggaattcctgatc
gacaaactggccatgaccaaaactaacgacgaattctttgacgcgatgcgccgtcagtaa
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