Vibrio fluvialis: AL536_19855
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Entry
AL536_19855 CDS
T04379
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vfl
Vibrio fluvialis
Pathway
vfl03420
Nucleotide excision repair
vfl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AL536_19855 (uvrD)
03430 Mismatch repair
AL536_19855 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vfl03400
]
AL536_19855 (uvrD)
Enzymes [BR:
vfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AL536_19855 (uvrD)
DNA repair and recombination proteins [BR:
vfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AL536_19855 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
AL536_19855 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
SseB_C
BTRD1
Motif
Other DBs
NCBI-ProteinID:
AMF95621
UniProt:
A0A0X8LP97
LinkDB
All DBs
Position
2:complement(2636977..2639151)
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AA seq
724 aa
AA seq
DB search
MIDPSLLLDGLNDKQREAVAAPLENLLVLAGAGSGKTRVLVHRIAWLMSVEQASPFSIMS
VTFTNKAAAEMRGRIEELMMGSSSGMWNGTFHGICHRILRAHYLDAKLPEDFQIIDSDDQ
QRLLKRLIKAQNLDDKQWPARQVSWWINGKKDEGLRPAHIDAYRDPVTQTYLQLYTAYQD
ACDRAGLVDFAEILLRALELLRDNKHIREHYQARFKHILVDEFQDTNNIQYAWLRMMAGP
QSHVMIVGDDDQSIYGWRGAKVENIEKFTLEFPSVNTIRLEQNYRSTKTILEASNTLIAN
NTERMGKELWTDGNVGEPISVYSAYNELDEARFVVGKIKEWQDKGGILNDCAILYRNNAQ
SRVLEEALLQTGLAYRIYGGMRFFERQEIKDALSYLRLMNNRNDDTAFERVVNTPTRGLG
DKTLDTVRFAARDRGCTLWEASVQLLDEKVLTGRAASALSRFVELINALEDDSAEMPLHS
QTDHVIKTSGLFDMYQQEKGEKSKARIENLEELVTATRQFEKPEEADEMTMLTAFLTHAA
LEAGEGQADEFDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLC
YVGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPETCLDEVRMKAQVSRPASSGRF
SQSAVKENFNETGFTLGSRVQHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYAK
LEKV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatccctctcttttacttgacggtttaaacgacaaacaacgcgaagcggtggcg
gcaccgcttgaaaacctgttggtgctggcaggggccggtagtggcaaaacccgggtgctg
gtgcaccgcatcgcttggctgatgtcggttgaacaggcctcgccgttctccatcatgtcc
gtgacctttaccaacaaagcggcggcggaaatgcgcggccgtattgaagaactgatgatg
ggcagttcgtccgggatgtggaacggtacgttccatggcatctgccaccgtattctgcgc
gcccattatcttgatgccaaactgccggaagattttcagatcatcgacagcgatgaccag
cagcgtctgctgaaacgtctgatcaaagcgcagaatctggacgacaaacagtggcctgcg
cgtcaggtgtcgtggtggattaacggcaagaaagacgaagggttgcgcccggcgcacatc
gacgcttatcgcgatccggtgactcagacgtacctgcaactctacaccgcgtatcaggat
gcctgtgaccgcgcgggtctggtcgatttcgccgaaattctgctgcgcgcgctcgagctg
ctgcgcgacaacaaacacattcgcgaacattatcaggcgcgctttaagcacattctggta
gacgaatttcaggacaccaacaacattcaatacgcgtggctgcgcatgatggcggggccg
cagtcgcacgtgatgatcgtgggcgatgacgaccagtcgatttacggctggcgcggggcg
aaagtggaaaacattgagaaattcaccttggaatttccgagtgtgaacaccattcgcctt
gaacagaactaccgctcgaccaaaaccattctcgaagcgtccaacaccctgatcgctaac
aataccgaacgcatgggcaaagagctgtggaccgacggcaacgtcggcgagccgatttcg
gtctactcggcgtacaacgagctggatgaagcgcgttttgtagtaggtaaaatcaaagag
tggcaggacaaaggcggcattctcaatgactgcgcgattttgtaccgcaacaacgcccag
tcgcgggtactggaagaagccctgctgcaaaccggattggcgtaccgcatttatggcggc
atgcgcttcttcgaacgtcaggaaatcaaagatgcgctgagctatctgcgcctgatgaac
aaccgcaacgacgacaccgcctttgagcgcgtggtcaacacgcccacccgtggtctgggc
gataagacgctggataccgtgcgctttgcggcgcgcgatcgcggctgcaccttgtgggaa
gccagtgtgcagctactggacgaaaaagtgctgacgggccgcgcggcttcagcactgagc
cgttttgttgaactgatcaacgcgctggaagatgacagcgccgagatgccgctccatagc
caaaccgaccatgtgatcaagacttcgggtctgtttgatatgtaccagcaggaaaaaggc
gagaagtccaaagcgcggattgaaaacttggaagagctggtcactgcgacccgccagttt
gaaaagccggaagaagcggacgaaatgaccatgctgaccgcgtttttgacccatgcggca
ctggaagcgggtgaagggcaagcggatgaattcgacgatgccgtgcagctaatgacgctg
cacagtgcgaaaggtctggagtttccgctagtgtttatggtgggcgtggaagagggcatg
ttccccagccagatgtcggccgaagaagcagggcgcctcgaagaggagcgccgtctgtgc
tacgtgggcatgacccgcgcgatgcagaagctgtacatcacctatgcggaaatgcgccgt
ctgtacggacaggacaaataccacaagccatcgcgctttattcgcgagttgccggaaacc
tgcctcgatgaagtgcgtatgaaagcgcaagtcagccgtccggccagcagcggccgtttc
agccagagcgcggtgaaagagaacttcaacgaaaccggctttacactcggctcacgtgtg
cagcatccgaaatttggtgaaggcaccatcattaactttgaaggcagcggtccgcaaagc
cgcgtgcaggtcgcctttaatggcgaaggcatcaagtggttggtgacggcttacgccaag
ctggaaaaagtctga
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