Vibrio fluvialis: AL536_20245
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Entry
AL536_20245 CDS
T04379
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
vfl
Vibrio fluvialis
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vfl03032
]
AL536_20245 (gyrB)
03400 DNA repair and recombination proteins [BR:
vfl03400
]
AL536_20245 (gyrB)
Enzymes [BR:
vfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AL536_20245 (gyrB)
DNA replication proteins [BR:
vfl03032
]
Prokaryotic type
DNA Topoisomerases
AL536_20245 (gyrB)
DNA repair and recombination proteins [BR:
vfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AL536_20245 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
GyrB_hook
Toprim
HATPase_c
HATPase_c_3
UFD1_N2
TcaA_2nd
Motif
Other DBs
NCBI-ProteinID:
AMF95686
UniProt:
A0AAX2LRK0
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Position
2:complement(2718587..2721004)
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AA seq
805 aa
AA seq
DB search
MSNNYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGYCKDII
VTIHEDNSVSVSDDGRGIPTELHPEEKVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKVVLTIHRGGKVHTQTYRHGVPEAPLAVIGDTDRSGTMVRFWPSAETFTNIE
FHYEILAKRLRELSFLNSGVSIKLVDEREEDKQDHFMYEGGIQAFVTHLNRNKTPIHEKV
FHFNSEREDGISVEVAMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRGALTRTLNNYMDK
EGFSKKAQAATSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVESAMNEKLAD
FLAENPSEAKNVCSKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQEKDPALSE
LYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIG
RDEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGYIYIAQPPLYKVKK
GKQEQYIKDEDAMNQYQISLALDNAELHVNPDAPALAGEPLEKLVQQYNAAIKLIERMSR
RYPHSLVHEFIYMPRLTAEQCQDQAAVEAWSQQLIEQLNAKEVGASQYNCVVEHNAEQNV
YSPKVKVRTHGVTHDYLLSVDLLNSREYGKLAELSEALHGLIEEGAYIQRGERTQPVTSF
AAALDWLIKESRRGLSVQRYKGLGEMNPDQLWETTMDPETRRMMQVTIDDAVGADELFTT
LMGDQVEPRRAFIENNALKVANLDV
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaataattacgattcatcgagtattaaagtactgaagggtctagacgcggtacgt
aagcgtccgggtatgtacatcggcgacactgatgatggcaccggtctgcaccacatggtt
tttgaggtggtggataactcgattgatgaagcgttagcgggttactgtaaagacatcatc
gtgaccattcacgaagataactcggtatcggtcagcgatgacggtcgtggtattccgacc
gagctccaccctgaagaaaaagtctctgcggcagaagttatcatgacggttctgcacgct
ggtggtaagtttgatgacaactcctacaaagtttccggtggtctgcacggggtaggtgtg
tcagtggtaaacgcgctgtcggaaaaagtggtactgaccattcaccgcggtggcaaagtt
cacacccaaacctaccgtcacggcgttcctgaagcgccgctggctgtgatcggcgatact
gaccgcagcggtaccatggtgcgtttctggccaagcgctgaaaccttcaccaacatcgaa
ttccattacgaaattctggcaaaacgcctgcgtgagctgtcgtttttgaactctggcgtc
tccatcaagctggtggatgagcgcgaagaagacaaacaagaccacttcatgtacgaaggt
ggtattcaggcattcgtgacccacctcaaccgcaacaaaacaccaatccacgaaaaagtg
ttccactttaactctgaacgtgaagacggcatcagcgtagaagtggcaatgcagtggaac
gatggtttccaggaaaacatctattgctttaccaacaacatcccacagcgtgatggcggt
actcacttagctggtttccgtggtgcgttgacccgtactttgaacaactacatggacaaa
gaaggcttctcgaagaaagcccaagcggcaacatcaggtgatgatgcgcgtgaaggctta
acggctgtggtgtcggtgaaagtgccagatcctaaattctcgagccaaaccaaagataag
ctggtttcttcggaagtgaaatccgcggttgagtcagccatgaatgagaagctggcggat
ttcctggcggaaaacccaagcgaagcgaaaaacgtttgttcgaagattattgatgcggcg
cgtgcgcgtgaagcagcgcgtaaagcacgtgaaatgacgcgtcgtaaaggcgcactggat
ctggctggtctgccaggcaaactggcggactgtcaggaaaaagatccagcgctgtctgaa
ctctacatagtggagggtgactcagcgggcggttctgcaaaacaaggtcgtaaccgtaag
aatcaggcgattctgccgctgaaaggtaaaatccttaacgtagagaaagcgcgttttgac
aagatgctgtcttcgcaagaggtggctacgctgatcaccgcactcggctgcggcatcggt
cgtgacgagtacaacccggataaactgcgttaccacaacatcatcatcatgaccgatgcg
gacgtcgatggttcgcacattcgtacgctgctgctgacgttcttctaccgtcaaatgcca
gagctgatcgagcgcggttacatctacattgctcagccaccactgtacaaagtgaagaaa
ggcaaacaagagcagtacatcaaagatgaagatgcgatgaaccagtaccagatttctctg
gcgctggataacgctgagctgcacgtgaacccggatgcgcctgcactggcgggtgaacca
ctggagaaactggtacagcagtacaatgccgccatcaaactgattgaacgtatgagccgc
cgctacccgcactcgctggtacacgaattcatctacatgcctcgtctgactgctgaacag
tgtcaggatcaggcggcagtggaagcgtggagccaacagttgattgaacagctgaacgcg
aaagaagttggcgcgagtcagtacaactgcgtggtagagcacaacgccgagcagaacgtt
tactcgccaaaagtgaaggtacgtacgcacggtgtgactcacgattacctgctgagcgtg
gatctgctgaactcacgagagtacggcaaactggctgagctgtcagaagcgttgcacggt
ctgattgaagagggtgcgtacattcaacgtggtgagcgtacacaacctgtgaccagcttt
gctgctgcactggactggttgatcaaagagtcacgtcgtggcctgtctgtacagcgatac
aaaggtctgggtgagatgaacccggatcagctgtgggaaaccaccatggacccggaaact
cgtcgtatgatgcaagtgaccatcgatgatgctgtgggtgccgatgagctgtttaccaca
ctgatgggtgaccaggttgaaccgcgtcgtgcgtttatcgaaaacaacgcactgaaagtg
gcgaacttggacgtataa
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