Vibrio fluvialis: AL536_21110
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Entry
AL536_21110 CDS
T04379
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
vfl
Vibrio fluvialis
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vfl03016
]
AL536_21110 (trmA)
Enzymes [BR:
vfl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
AL536_21110 (trmA)
Transfer RNA biogenesis [BR:
vfl03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
AL536_21110 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
MTS
Methyltransf_31
Cons_hypoth95
Methyltransf_11
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_12
PrmA
DUF6579
DREV
Motif
Other DBs
NCBI-ProteinID:
AMF96209
UniProt:
A0AAX2LSC8
LinkDB
All DBs
Position
2:complement(2892503..2893612)
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AA seq
369 aa
AA seq
DB search
MATLDVNPNHYQAQLDDKVTRLTDMFQAYQVPELEVFESPQQHYRMRAEFRVWHEGEDMY
YIMFNPETREKYRVDQFPAASRLINDLMPLLMDAMKGDDTLRRKLFQVDFLSSLSGEVLV
SLLYHRQLDDAWTAAAKKLKQRLNDEGFNLNLIGRARKMKIVLDRDYVVEKLHVNGQPYI
YQQVENSFTQPNGKVAEKMLEWAVDCTQESKGDLLELYCGNGNFSLALAQNFERVLATEL
AKPSVESAQYNIAANHIDNVQIIRMSAEEFTQAMEGKREFNRLKDAGVDLKSYNCNTIFV
DPPRSGMDIDTCKMVQGYERILYISCNPETLKENLDVLCETHNVTRFALFDQFPYTHHME
AGVLLERIK
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcgactctcgacgtaaacccgaaccactaccaagctcagctggacgacaaggtcact
cgcctgaccgacatgttccaggcctatcaggtaccggagctggaagtgtttgagtcgccg
cagcaacactaccgtatgcgcgctgagttccgcgtgtggcatgaaggcgaagacatgtac
tacatcatgttcaacccggaaacccgcgaaaagtaccgtgtcgatcagttcccggcggca
agccgtttgatcaatgatctgatgcctctgctgatggatgccatgaaaggcgatgacacg
ctgcgtcgtaaactgttccaggtcgatttcctttcgtcgctgagcggtgaagtgctggta
tcgctgctttaccaccgccagttggatgacgcgtggaccgcggctgcgaagaaactcaaa
cagcgcctgaatgatgagggcttcaacctcaacctgattggccgcgcacgcaaaatgaaa
atcgtgctggatcgcgattacgtggtggaaaaactgcacgtgaacggccagccgtacatt
tatcagcaagttgaaaacagctttacccagcccaacggtaaagtggcggaaaaaatgctg
gaatgggccgtcgactgcacccaggaaagtaaaggtgacttgctggagctgtactgtggt
aacggcaacttctctctggctctggcacaaaactttgagcgtgtactggccaccgaactg
gccaagccttctgtagaatcagcgcaatacaacattgccgcgaaccatatcgacaacgta
cagatcatccgtatgtcagcagaagagtttactcaggcaatggaaggcaaacgtgagttt
aaccgcctgaaagatgcgggcgtagatctgaagagctacaactgcaacactatttttgtc
gatccaccgcgctcaggtatggatatcgacacctgtaagatggtgcaaggttacgagcgt
attctttacatctcgtgtaacccggaaacactaaaagagaacttggatgtcttgtgcgaa
acccacaatgtgacccgttttgcactgttcgaccaattcccttacacccaccacatggaa
gcgggtgtgcttctagagcgcattaagtaa
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