Vibrio fluvialis: AL536_21595
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Entry
AL536_21595 CDS
T04379
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vfl
Vibrio fluvialis
Pathway
vfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AL536_21595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vfl03400
]
AL536_21595
Enzymes [BR:
vfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AL536_21595
DNA repair and recombination proteins [BR:
vfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AL536_21595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
PriA-like_WH
AAA_30
AAA_19
AAA_16
zinc-ribbons_6
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AMF95929
UniProt:
A0A0X8LPW0
LinkDB
All DBs
Position
2:3002889..3005090
Genome browser
AA seq
733 aa
AA seq
DB search
MRPTIARVALPVPLDKQFDYLIPSHLFPIIGGRVSVPFGRQTLVGIVTALVQESEFPREQ
LKVIKAVLDSQPVWPETLYRLLHWCSQFYQYPLGDTLANAMPGALRKGKPADFASSKEWQ
ITERGRDQLMQGFGRAIKQAQVMHLVQSGPVAHQIMLDEEVSSATLNTLQDKGWIEVTEK
QPQFRPWPKEIEAQVDKPRLNQEQAIAIASVNSQRGFGCYLLQGVTGSGKTEVYLNLIKP
VLEAGRQALVLVPEIGLTPQTINRFRKRFDVPVEVIHSGLNETERLNAWLAARDKIAGIV
IGTRSALLTPFADLGIIIVDEEHDASYKQQDSLRYHARDVAVMRANLEQVPIVLGSATPA
LETLHNALTGKYHHLQLTQRAGAALPTTNRVLDVKGLYLESGLSAPLIAEMRRHLSQGNQ
VLLFLNRRGFSPALMCHECGWIADCQRCDAYYTYHQYSNEIRCHHCGSQRPVIHQCQGCG
STHLVTVGVGTEQLEAQLGELFPEYKAIRIDRDSTRRKGSLESALNAIRRGEYQILIGTQ
MLAKGHHFPDVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTHH
PEHSLLQALLNNDYNHFAEQALAERKLAQLPPYTYLTLFRAEGNQSPMVEDFLRQVRHTL
EAHPLCEQGCMVLGPTPAPLAKRAGKFRWQLLLQAPSRSVMQKLLASAKPAIQLLPLAGK
VRWSLDIEPQDLS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcgcccaactattgcccgtgttgccttgccggtgccactggataagcaatttgattac
ctgattcccagccatctgtttccgatcatcggcggacgggtgtcggtgccgtttggccgc
cagacgctggtcggcatcgtcacggcactggtgcaggaatcggaatttccgcgtgagcag
ttaaaagtgatcaaagcggtgctggattcgcagcccgtgtggccggagaccctgtaccgc
ctgctgcactggtgtagccagttttatcagtatccactcggcgacacgctggccaatgcg
atgccgggtgcgctgcgcaaaggcaaaccagccgattttgccagcagtaaagagtggcag
attaccgaacgtggccgtgatcaactgatgcaggggtttggccgggcgattaaacaggct
caggtgatgcatttggtgcaatcaggtccggtggcgcatcagatcatgctggatgaagaa
gtgtccagtgccacattgaataccttgcaagacaaaggttggattgaagtcactgaaaag
cagcctcagtttcgcccgtggccgaaggagattgaagctcaggtggataaacctaggctc
aatcaggagcaggcgattgcgattgcatcggtgaacagtcagcgtggttttggttgttat
ctgctgcaaggcgtcacggggtcgggtaaaacggaggtttacctcaatctcatcaagccg
gtgttggaagccgggcggcaagcgttggtgctggtgccggaaattggcctcacgccccag
accatcaaccgttttcgcaagcgttttgatgtgccggtcgaagtgattcactcggggctg
aatgaaacggaacgcctcaatgcctggctggcggcgcgcgataaaattgcgggcattgtg
attggcacgcgctcggcgctgctgacaccgtttgccgatctcggcatcattattgtcgat
gaagagcacgacgcctcttataaacaacaagacagcctgcgttatcacgcgcgggatgtc
gccgtcatgcgcgccaatcttgagcaggtgccgattgtgctgggttcggccacgccggct
ctggaaacgctgcacaatgcgctgacgggtaaatatcatcatctgcaactgacgcagcgc
gccggagcggcactgccgaccactaaccgggtgttagacgtcaaaggcttatatcttgaa
agtggcttgtcggcaccgctgatcgccgaaatgcgccgccacttgtcgcaaggcaatcag
gtgctgttgttcctcaaccgtcgcggtttttcgcccgcgctgatgtgccacgaatgtggc
tggattgccgactgtcagcgctgcgatgcctactatacctatcatcagtacagcaatgaa
atccgctgccaccattgtggttcgcagcgtccggtgattcaccaatgtcagggctgcggc
tcgacgcatctggtgaccgtcggtgtcggcaccgagcagctggaagcgcagctcggtgag
ctgtttccggaatacaaagcgattcgtatcgatcgcgacagcacgcgccgcaaaggcagt
ctcgaatcggcactcaacgcgattcgccgcggcgaatatcaaattctgatcggcacgcag
atgctggccaaaggtcaccacttccccgatgtgacgctggtagcgctactggatgtcgat
ggctcgctgtacagcagcgattttcgtgcctctgagcgtctggcgcagctgtttattcag
gtcgccggccgtgcgggccgagcgagtaaacccggcgaagtggtgttgcagacccatcat
cccgagcacagtttgctgcaagctttgctgaataacgactacaaccattttgccgagcag
gcgttggctgagcgcaaactggcgcaattgccgccgtacacttatctgaccttgtttcgc
gccgaaggcaaccagtcgccaatggtggaagattttctgcgccaggtgagacacacctta
gaagcgcatccgctgtgtgaacagggctgcatggtgctcggcccaactcctgcacctctg
gcaaaacgcgcgggcaaattccgctggcaattattgctgcaggcgccgagccgttcagtg
atgcaaaagctgctcgccagtgccaaacctgcgattcagttgctgccgctggcggggaaa
gttcgctggtcattggacatagaaccacaggatctgagctga
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