Aliivibrio fischeri MJ11: VFMJ11_0024
Help
Entry
VFMJ11_0024 CDS
T00754
Symbol
fadB
Name
(GenBank) fatty oxidation complex, alpha subunit FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vfm
Aliivibrio fischeri MJ11
Pathway
vfm00071
Fatty acid degradation
vfm00280
Valine, leucine and isoleucine degradation
vfm00310
Lysine degradation
vfm00362
Benzoate degradation
vfm00380
Tryptophan metabolism
vfm00410
beta-Alanine metabolism
vfm00640
Propanoate metabolism
vfm00650
Butanoate metabolism
vfm00907
Pinene, camphor and geraniol degradation
vfm00930
Caprolactam degradation
vfm01100
Metabolic pathways
vfm01110
Biosynthesis of secondary metabolites
vfm01120
Microbial metabolism in diverse environments
vfm01200
Carbon metabolism
vfm01212
Fatty acid metabolism
Module
vfm_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
VFMJ11_0024 (fadB)
00650 Butanoate metabolism
VFMJ11_0024 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
VFMJ11_0024 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VFMJ11_0024 (fadB)
00310 Lysine degradation
VFMJ11_0024 (fadB)
00380 Tryptophan metabolism
VFMJ11_0024 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
VFMJ11_0024 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
VFMJ11_0024 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VFMJ11_0024 (fadB)
00930 Caprolactam degradation
VFMJ11_0024 (fadB)
Enzymes [BR:
vfm01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
VFMJ11_0024 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
VFMJ11_0024 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
VFMJ11_0024 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
VFMJ11_0024 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
DUF5546
CID_GANP
Motif
Other DBs
NCBI-ProteinID:
ACH65088
UniProt:
B5FEW8
LinkDB
All DBs
Position
I:complement(25971..28148)
Genome browser
AA seq
725 aa
AA seq
DB search
MIYQGENLSVDYIEPGIAHLVFNAKGSVNKLNLATLQSVGEAIDALYSQKDLQGLLLSSD
KSAFIVGADITEFLGLFDIPTEELSDWLHQANAIFNRLEDIPVPTLSAITGFALGGGCEC
VLATDFRLADETASIGLPETQLGIMPGWGGSVRLPRLIGADPAMEVITTGKPKRAKDALA
LGMIDGVVSRETLITDSVTMLKKAIGGQLDWQSRRTQKKAPLKLSPLEAAMSFNVAKGMI
MKMAGKHYPAPMTAVKSIENSAFMDRDAALEVENKNFVALTQTDVAKSLVGIFLNDQLVK
SKAKQAIKNSEPVTSAAVLGAGIMGGGIAYQSASKGVPVLMKDIAQQSLDLGMNEASKLL
NKQLERGRLSGLKMAQVLSSITPSLNYASIENKDIVVEAVVENPKIKAAVLAEVENEVNE
HAILASNTSTIPISLLAKSLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSQQTIDRVVAY
ASQMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGGDYQQIDKVMEKEFGWPMGPAYL
LDVVGIDTAHHAQAVMAQGFPERMAKNGRDVIDAMFESDRYGQKNGSGFYAYSIDRKGKP
KKNIDESTAGIIATVTNTTQPYTSEQISARMMIPMINEVIRCLDEGIIASPAEADMALVY
GLGFPPFKGGVFRYLDAIGLTTYLDMAKEFEHLGAVYQVPESIKQKAADGECYYPAPQSL
SAPSA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgatttatcaaggtgaaaacctctctgtagactacatcgaaccaggcattgctcactta
gtatttaatgctaaaggcagtgtaaataagctcaacttagccaccctacaatcggttggt
gaagccatagatgcactctactcacaaaaggacttacaaggtctacttctatcatcagat
aaaagtgcatttattgttggtgctgatattacggagtttcttggtttgtttgatattcca
acagaagaactcagtgattggttacatcaagctaacgccatttttaatcgtctagaagac
attccagtacctactttatctgctattactggatttgctttaggaggcggttgtgaatgt
gtccttgctacggattttcgattagcagatgaaacggcatctatcggtctacccgaaaca
cagcttgggatcatgcccggttggggtggctctgtgcgtttacctcgcttaattggtgcc
gaccctgcaatggaagtcatcacaacgggtaagccaaaacgagcaaaagatgccttagct
ctgggaatgattgatggtgttgtttcacgtgaaaccttgataacagattctgttactatg
cttaaaaaagcgatagggggtcaactggattggcaatctcgtcgtacacagaaaaaagca
ccattaaaactctctcctctagaggctgcaatgtcatttaatgtcgcaaaaggcatgata
atgaaaatggcaggtaaacattatcctgcaccaatgacagcagtaaagtccattgaaaat
agtgccttcatggatcgtgatgctgcacttgaagttgaaaataaaaacttcgttgcactc
actcaaacagatgtggctaagtcattagttggtattttcttaaacgatcaattagtgaag
agtaaagcgaaacaagccataaaaaatagtgaacccgttactagcgcagcggttcttggt
gctggaattatgggtggaggtattgcttatcaatccgcatcaaaaggcgtccctgtatta
atgaaagacattgctcaacaatcattagatttaggcatgaatgaagcctctaaactactt
aataaacaattagaacgaggacgcttatctggtttaaagatggcacaagtactctcttct
attaccccatcactaaactatgccagtattgaaaacaaagatattgtcgtagaagccgtc
gttgagaacccaaagattaaagctgcagtattagctgaagttgaaaatgaagtaaatgag
catgccatcttagcctcaaacacatcgacaatacctatttccttactagcaaaatcatta
aaacgcccagaaaatttctgtggcatgcacttcttcaatcctgtacatcggatgccactc
gttgaagtgatccgtggtgaaaaaacgtcacaacaaaccattgatcgtgttgttgcttac
gcttctcaaatgggaaaaacacctattgtcgtcaatgactgccctggattttttgttaac
cgagttcttttcccttatttcgcagggttcagtttattgctgcgtgatggcggtgactat
caacaaatagataaagttatggaaaaagagtttggttggccaatgggtccggcttattta
cttgatgtcgttggtattgatacagcacatcacgcacaagctgtcatggcacaaggtttc
cctgagcgaatggcaaaaaatggacgagatgtgattgatgcgatgttcgaatccgatcgc
tacggtcaaaaaaatggaagcggtttttatgcatatagcatagatagaaaaggcaaacct
aaaaagaacattgatgaaagcacagcaggcattattgcgacagtaaccaatacaacgcaa
ccttatacatcagagcagatcagtgctcgcatgatgatacctatgattaatgaggtcatc
cgctgcttagatgaaggaattattgcctctcctgccgaagctgacatggcattggtttat
ggtttgggcttccctccatttaaaggaggagtattccgctatcttgatgcaattggatta
accacttatctcgacatggcaaaagaatttgaacatctaggtgccgtttatcaagtacca
gaaagcatcaaacaaaaagcagccgatggtgaatgttattacccagctcctcaatcatta
tcagcaccgtcagcctag
DBGET
integrated database retrieval system
