Aliivibrio fischeri MJ11: VFMJ11_0033
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Entry
VFMJ11_0033 CDS
T00754
Symbol
thiC
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
vfm
Aliivibrio fischeri MJ11
Pathway
vfm00730
Thiamine metabolism
vfm01100
Metabolic pathways
vfm01240
Biosynthesis of cofactors
Module
vfm_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
VFMJ11_0033 (thiC)
Enzymes [BR:
vfm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
VFMJ11_0033 (thiC)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ACH64844
UniProt:
B5FF66
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Position
I:37014..38948
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AA seq
644 aa
AA seq
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MSSSRKQARLDAKTNIESLSVQPYPNSNKVYIEGSRPDIRVPMREISLADSLVGGTKESP
IFEPNEPIQVYDTSGVYTDPSYDIDVYRGLPKLRQEWIEERNDTELLDGVSSVYSQERLA
DETLDELRYGNLPTIRRAKQGQCVTQLHYARQGIITPEMEYIAIRENMGRQKFADEQLNH
QHPGHSFGANLPKEITPEFVRKEVAEGRAIIPSNINHPEAEPMIIGRNFLIKVNANIGNS
SVSSSIEEEVEKLVWSTRWGGDTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKV
NGVAENLNWEVMRDTLIEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWC
LAHHQESFLYTHFREICEICAKYDVALSLGDGLRPGSVADANDEAQFAELRTLGELTKVA
WEYDVQVIIEGPGHVPMHMIKENMDEQLKHCHEAPFYTLGPLTTDIAPGYDHITSGIGAA
MIGWYGCAMLCYVTPKEHLGLPNKDDVKTGLITYKLAAHAGDLAKGHPGAQIRDNALSKA
RFEFRWEDQFNLSLDPITAREYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVREYAKD
SEQVALDQAIEIKMIDDPLEGMRQKSEEFKASGSELYHPAVEAE
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcaagccgtaaacaagcacgtttagatgctaaaaccaatattgaatcgttatcg
gttcaaccatatccaaattcaaataaagtctatattgaaggctcccgtcctgatattcgc
gttcctatgcgagagatttcattagctgacagtttagttggtggtaccaaagaatcacca
atttttgaaccaaatgaacctatccaagtttatgacacttcaggtgtgtataccgatcca
agctacgatatcgatgtatatagaggattacctaagttgcgtcaagaatggatagaagag
cgaaatgataccgagttacttgatggcgtgagctctgtttattcgcaagagcgtttagcg
gatgaaactcttgatgaacttcgttatggaaatctcccaacgattcgccgtgctaaacaa
ggccagtgtgttactcaactgcattatgcgcgtcagggaatcattactcctgaaatggaa
tatatagcgattcgtgaaaacatgggtcgtcaaaagtttgcagatgagcaacttaatcac
caacatcctggccatagttttggggctaacttaccgaaagaaatcacacctgaatttgtg
cgtaaagaggttgctgaagggcgcgcaattatcccatcaaacataaaccatccagaagca
gaaccaatgatcattggtcgtaatttcttaattaaagttaacgctaatattggtaactca
tcggtgagttcatcaattgaagaagaagtggagaagctagtttggtcaactcgttggggc
ggtgatacggtgatggatttatctacgggccgaaatattcatgaaactcgtgagtggatt
ctacgtaatagccctgtcccaattggcacggttccaatgtatcaagcgctagaaaaagtg
aatggtgtagccgaaaaccttaactgggaagtgatgcgagataccttaatcgagcaggct
gaacagggcgtcgattactttaccattcacgcaggtttactgcttcgttatgtaccaatg
acagcaaaacgcgttaccgggattgtatctcgtggcggctctattattgctaagtggtgt
cttgctcatcaccaagaaagcttcctttatacacacttccgtgagatctgtgaaatttgt
gctaaatacgatgtggccttatctttgggtgatggattgcgtccgggctctgttgctgac
gctaatgatgaagcgcaatttgctgaattacgcactttaggtgagctaactaaagttgcg
tgggaatacgatgttcaagtcattattgaaggtccaggtcatgttcctatgcacatgatt
aaagagaatatggatgaacaacttaaacattgtcatgaagcgccattttatacattaggc
ccactaacgacagatattgctcctggatatgatcacattacttcaggcattggtgctgcc
atgatcggttggtatggctgtgccatgttgtgttacgtaacgccaaaagaacacttaggg
ttaccaaataaagacgatgtgaagacaggcttgattacttataagttagcagcacacgca
ggcgatttagccaaaggtcatccgggtgcacaaattcgtgataacgccttatcaaaagcc
cgctttgaattccgttgggaagaccagtttaatctgtctcttgatcctattaccgctcgt
gaatatcacgatgaaaccttaccgcaagaatcgggcaaagttgctcacttttgttcaatg
tgtgggcctaagttctgctcaatgaagatctcacaagaagtcagagagtacgctaaagat
tcggaacaagttgctttagaccaagcaatcgaaattaagatgatagatgaccctctagaa
gggatgcgtcaaaagtcagaagagtttaaagcgtctgggtctgaactttatcatcctgca
gttgaagctgaataa
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