Aliivibrio fischeri MJ11: VFMJ11_0530
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Entry
VFMJ11_0530 CDS
T00754
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vfm
Aliivibrio fischeri MJ11
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vfm03400
]
VFMJ11_0530 (radA)
DNA repair and recombination proteins [BR:
vfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VFMJ11_0530 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
Rubredoxin_2
Lon_C
DnaB_C
GvpD_P-loop
SLFN-g3_helicase
AAA
AAA_22
ABC_tran
AAA_14
AAA_16
AAA_24
nSTAND3
Rad51
NTPase_1
Viral_helicase1
Zeta_toxin
AAA_29
Thio2_N
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ACH66366
UniProt:
B5FAC2
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All DBs
Position
I:554020..555402
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AA seq
460 aa
AA seq
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MAKAKRAYVCNDCGADFPRWQGQCNVCGAWNTITEVRLAASPQVARNERLSGGYAGSTTD
SEVQTLSSIDLQEVPRFSSSFKEFDRVLGGGIVPGAAILIGGNPGAGKSTLLLQTMCRLA
AEMPTLYVTGEESLQQVAMRASRLGLPKDNLKMLSETNIDKICQVAEKEQPKIMVIDSIQ
VMHVADVQSSPGSVAQVRESATALTRYAKQNNVAIFLVGHVTKDGTLAGPKVLEHIIDCS
VLLDGSADSRFRTLRSHKNRFGAVNELGVFAMTGQGLKEVNNPSAIFLSRGEEETSGSSV
MVVWEGTRPLLVEIQALVDYSQLSNPRRVSVGLDQNRLSMLLAVLHKHGGLQMADQDVFV
NVVGGVKVAETSADLALIMALLSSFKDRPLAKDVVVFGEVGLAGEIRPVPSGQERLMEAY
KHGFKKAIVPAANMPKGGIEGMQIHGVKKLSEAIDAFDEL
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcaaaacgcgcctacgtttgtaatgattgtggggcagacttccctcgttgg
caaggacagtgtaatgtttgtggggcatggaacacgattacagaggttcgtttggctgct
tctccacaagttgctcgtaatgaacgtttatctggtggttatgcaggttccactacagac
tctgaagttcaaactctatcgagtattgatttacaagaagttcctcgattcagtagttcg
tttaaagagtttgaccgtgttctcggtggtggcattgttcctggtgctgcaattttgatt
ggtggtaatccaggcgctggtaaatctactttacttttgcaaaccatgtgtcgtttggct
gctgaaatgccaacattatatgttactggtgaagaatcgttacagcaggtagcaatgcga
gcttctcgccttggtttgccaaaagataatttgaaaatgttatctgaaaccaatatagac
aagatttgtcaggttgctgagaaagaacagccaaaaataatggttattgactctattcaa
gtaatgcatgttgcagacgtgcaatcatcaccgggcagcgtcgcgcaggttcgtgagtca
gcaaccgctttaactcgatatgctaagcaaaataatgtagctattttcttagtgggtcac
gtaaccaaagatggtactttagctggtcctaaagtattggaacatattattgactgttct
gtgttacttgacggtagtgcagatagccgctttagaacgcttcgtagtcataaaaaccgt
tttggagctgttaatgagcttggggtttttgctatgacaggccaaggcttaaaagaagta
aataacccatcagccattttcttatctcgtggagaagaggaaacctctggtagctcagtg
atggttgtgtgggaaggaacacgaccgttacttgtagagatacaagctttagtcgattac
tctcagctttcaaatcctcgtcgagtctctgttggcttagatcaaaaccgtttatctatg
ctattagcggttttacataaacatggtggtttgcaaatggctgaccaagatgtgtttgtt
aacgtggttgggggcgttaaggtagctgaaaccagtgcggatttggcacttattatggcg
ctactatctagttttaaagaccgtccattagctaaggatgtagtggtctttggtgaagtt
ggtcttgctggtgagattcgcccagttccaagtgggcaagagcgtttaatggaagcatat
aagcatggcttcaaaaaagcgattgtacctgctgcaaacatgccaaaaggtggcatagaa
ggaatgcaaattcacggtgttaagaagctatctgaagcaattgatgcttttgatgaactt
taa
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