Aliivibrio fischeri MJ11: VFMJ11_0560
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Entry
VFMJ11_0560 CDS
T00754
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
vfm
Aliivibrio fischeri MJ11
Pathway
vfm02024
Quorum sensing
vfm03060
Protein export
vfm03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
VFMJ11_0560 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
VFMJ11_0560 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VFMJ11_0560 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
vfm02044
]
VFMJ11_0560 (ffh)
Enzymes [BR:
vfm01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
VFMJ11_0560 (ffh)
Secretion system [BR:
vfm02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
VFMJ11_0560 (ffh)
Eukaryotic Sec-SRP protein
VFMJ11_0560 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
KTI12
cobW
AAA_30
YqeC
APS_kinase
AAA_33
AAA_19
T2SSE
AAA_31
AAA_18
ABC_tran
AAA_14
AAA_24
Mg_chelatase
TsaE
Thymidylate_kin
ArsA_ATPase
Motif
Other DBs
NCBI-ProteinID:
ACH65987
UniProt:
B5FAE4
LinkDB
All DBs
Position
I:585160..586533
Genome browser
AA seq
457 aa
AA seq
DB search
MFDNLTDRLSRTLKNISGKGRLTEDNIKETLREVRMALLEADVALPVVRDFVKRVKEGAV
GVEVSKSLTPGQEFIKIVQAELEAVMGDSNEALNLACQPPAVILMAGLQGAGKTTSTGKL
AKLLKERDKKKVLVVSADVYRPAAIKQLETLATDVDVDFFPSSADQKPIDIVDAAISHAK
LKFFDVVIVDTAGRLAVDTEMMDEIKQLHAHVNPIETLFVVDAMTGQDAANTAKAFGDAL
PLTGVILTKVDGDARGGAALSVRHITGKPVKFLGVGEKTDALEPFHPERIASRILGMGDV
LSLIEDLEKNVDKEKAEKLAKKFKEKKGFDLEDFREQLGQMKNMGGMMGMMDKLPGMSQL
PSDVKDKVDDKMFNQMEAIINSMTMKERQRPEIIKGSRKKRIAAGSGVQVQDVNRMLKQF
TQMQKMMKKMQKGGMKGMMRNMQGMMGGMGGMGGFGR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataatttaacggatagactatccagaacactgaaaaatatcagtggtaaaggt
cgattaacagaagacaacattaaagaaacgctacgtgaagttcgtatggcgttactggaa
gctgacgtagctttaccagtggttcgtgattttgtaaaacgcgtaaaagaaggtgcggtt
ggtgttgaagtatcaaaaagcttaacgccaggccaagagttcataaaaattgttcaagct
gaactagaagcggttatgggggattctaacgaagccctaaacttagcttgtcagccacct
gctgttattttaatggctggtttacaaggtgcaggtaaaacgaccagtacgggtaaatta
gctaaattattaaaagagcgcgataagaaaaaagtattagttgtttctgccgatgtttat
cgtcctgcggcgatcaaacagttagaaactttagctacagatgtggatgttgatttcttc
ccatctagtgcagatcaaaagcctattgatattgttgatgcggcgattagccacgcaaaa
ctgaagttctttgatgttgttattgtcgatacagcaggccgtttggctgttgataccgaa
atgatggatgagatcaaacagcttcatgcgcatgtaaatccgattgagactctgtttgtt
gttgatgcaatgacaggtcaagatgcggcaaatacagcaaaagcgtttggtgatgcttta
cctctaaccggtgttatcttaacaaaggttgatggtgatgctcgtggtggtgctgcatta
tcagttcgtcatattacaggtaaaccagttaaatttttaggtgttggtgaaaaaactgac
gcactagaaccgttccacccagaacgtattgcttctcgaattttaggtatgggtgatgtt
ctttctttaattgaagatcttgaaaagaacgtagataaagaaaaagcagagaaactggcg
aaaaaattcaaagagaaaaaaggctttgatttagaagatttccgtgagcagcttggtcag
atgaaaaacatgggcggcatgatgggcatgatggataagcttccaggaatgtctcagcta
ccaagtgatgtgaaagataaagttgatgataaaatgttcaatcaaatggaagcgattatt
aattccatgacaatgaaagagcgtcaacgtcctgaaatcatcaaaggttcacgtaaaaaa
cgtattgctgctggttctggtgtacaagttcaagatgtaaaccgtatgctaaaacaattc
acccaaatgcagaagatgatgaagaaaatgcagaagggtggcatgaaaggcatgatgcgt
aatatgcaaggtatgatgggtggtatgggcggaatgggtggcttcggtcgctaa
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