Aliivibrio fischeri MJ11: VFMJ11_0715
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Entry
VFMJ11_0715 CDS
T00754
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vfm
Aliivibrio fischeri MJ11
Pathway
vfm00260
Glycine, serine and threonine metabolism
vfm00460
Cyanoamino acid metabolism
vfm00630
Glyoxylate and dicarboxylate metabolism
vfm00670
One carbon pool by folate
vfm00680
Methane metabolism
vfm01100
Metabolic pathways
vfm01110
Biosynthesis of secondary metabolites
vfm01120
Microbial metabolism in diverse environments
vfm01200
Carbon metabolism
vfm01230
Biosynthesis of amino acids
vfm01240
Biosynthesis of cofactors
vfm04981
Folate transport and metabolism
Module
vfm_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VFMJ11_0715 (glyA)
09102 Energy metabolism
00680 Methane metabolism
VFMJ11_0715 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VFMJ11_0715 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VFMJ11_0715 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VFMJ11_0715 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VFMJ11_0715 (glyA)
Enzymes [BR:
vfm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VFMJ11_0715 (glyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
OKR_DC_1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ACH67091
UniProt:
B5FBF0
LinkDB
All DBs
Position
I:748313..749563
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AA seq
416 aa
AA seq
DB search
MLKRDMNIADYDADLFAAIQEETVRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDKVETLAIERACELFGAEYANVQPHSGSQANNAVYMALLNAGDTVLGMS
LAHGGHLTHGSPVNFSGKLYNIIPYGIDENGQIDYEEMEALAVEHKPKMIIGGFSAYSQV
CDWARMREIADKVGAYFFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL
SNEGEDLYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKEYQARVVANAKAMVAE
FLARGYNIVSGSTENHLFLVDLIDKDITGKEADAALGSANITVNKNSVPNDPRSPFVTSG
IRIGSPSITRRGFTEEDAKNLAGWMCDILDNMGDESVIEATKAKVLEICKRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgtgatatgaacattgccgattacgatgcagacttatttgcagcaatccag
gaagaaacagtacgtcaagaagagcatatcgagctgattgcttctgaaaactacactagc
ccacgagtaatggaagctcaaggttcacaattaacgaacaaatatgctgaaggttaccct
ggcaaacgttactacggtggttgtgagtacgtagataaagttgaaacacttgctattgaa
cgtgcatgtgagttgtttggtgctgagtacgcaaacgtacagcctcactctggttcacaa
gcgaataacgcagtttacatggcactgctaaatgctggtgatactgtattaggtatgagc
cttgctcacggtggtcacttaactcacggttctccagtaaacttctctggtaaactttac
aacatcattccttacggtattgatgaaaatggtcaaattgactatgaagaaatggaagca
ttagcagtagaacataaacctaagatgatcatcggcggtttctctgcttactctcaagta
tgtgattgggcacgtatgcgtgaaatcgcagacaaagttggcgcttacttctttgtagat
atggctcacgtagcaggtcttattgctgcaggtgtttaccctaaccctgtgcctcatgct
cacgttgtaacaacaacaacacacaaaacacttgctggtcctcgtggtggtcttatcctt
tctaatgaaggggaagatctttacaagaagttaaactcagcagtattcccgggtggtcaa
ggtggtcctttaatgcatgttattgctggtaaagcagttgcatttaaagaagcgcttgag
cctgagttcaaagaatatcaagcacgtgttgttgctaatgcaaaagcaatggttgctgaa
ttcttagctcgtggttacaacatcgtttcaggttcaacagagaaccacctgttcctagtt
gatttaattgataaagatattacaggtaaagaagcggatgctgcactaggttctgctaac
attacagtaaacaagaactcagtacctaatgaccctcgtagcccgtttgttacttctggt
attcgtattggttctccttcaattacgcgtcgcggttttactgaagaagatgcgaaaaac
cttgcgggctggatgtgtgacattctagataacatgggtgatgagtctgtaattgaagcg
acaaaagcaaaagtattagaaatctgtaagcgtctaccagtttacgcttaa
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