Aliivibrio fischeri MJ11: VFMJ11_0767
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Entry
VFMJ11_0767 CDS
T00754
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vfm
Aliivibrio fischeri MJ11
Pathway
vfm00550
Peptidoglycan biosynthesis
vfm01100
Metabolic pathways
vfm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VFMJ11_0767 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VFMJ11_0767 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vfm01011
]
VFMJ11_0767 (mrdA)
Enzymes [BR:
vfm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
VFMJ11_0767 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
vfm01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
VFMJ11_0767 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ACH67231
UniProt:
B5FBK2
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All DBs
Position
I:complement(804613..806493)
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AA seq
626 aa
AA seq
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MIKRKRTQIRDYHAETRLFASRAIISFSGIIVLIGLLLTNLYNIQINEFQDYKTRSNDNR
IKIVPIAPNRGLIFDRNGNPLAENRPVFNLEVTPDKVSDLSLLFTELQTILPITQDNIDD
FQKERRRTRRFKSVPLLTQLTQEQVAIFSVNQHKFQGVEIKAYLKRFYPYGKTLTHVLGY
VAKINDRDLARLAREEKDANYQATRDIGKLGIERFYEDILHGTAGYQEVEVNSRGRVIRT
LKYVPPIPGKDIVLNLDIKLQKFVEKQLDGRRGSAIVLDPKTSAVLAMVSSPSYDPNLFV
HGISSKNYSALLNDPDRPLVNRSTLGIYPPASTVKPFIAVSALKEKIVTTETTRDDPGYW
RIPNSKTKPFRDWKRWGHGTVNLKQSIEESVDTFFYQIAYDMGIDRLSSWMMKFGFGDYT
GIDIREESKANMPTREWKVARFRTPWYQGDTIPVGIGQGYWTATPMQLAKATAVLTNHGK
VQAPHLLKGIIENNKEVPYEPEPYPPIEGVKDSYWQLAIDGMILVNNGRKGTARRAFAGT
PYVSAGKSGTSQVFGLKEDEEYNADEIAEHLRDHALFTGFAPAKDPKVIISLVLENGGGG
SSQGGPIARHVFDYVLLPKTEEAAKK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
ttgattaagcgcaaacgcacacagatccgtgactatcacgctgaaacgagattatttgca
tcacgtgcaattatctcgttttcagggatcattgtacttattggtctgcttttgactaac
ttgtacaacattcaaatcaatgaatttcaagattataaaacacgctcaaatgataaccgt
attaagatagtccctatcgcaccaaaccgaggattaatctttgatagaaacggaaatcca
ttagcggaaaaccgccctgtttttaatttagaagtcacccctgacaaagtgtcagatctt
tctcttttgtttacagaattacaaactatcttgccaataacacaagataatattgatgac
tttcagaaagaacgtcgccgaactcgtcgttttaaatccgtccctcttcttactcaatta
acacaagagcaagttgctatattttctgttaatcagcacaaattccaaggggttgaaata
aaagcctacttaaaacgcttttatccttacggtaaaacactcactcatgttcttggttat
gtagctaaaattaacgatcgtgatttagctcgtttagcacgagaagaaaaagacgcaaat
tatcaagcaacccgtgatattggtaaattaggtattgaacgtttttatgaagatattctt
catggaaccgcaggttatcaagaggttgaagttaatagccgaggtcgtgttattcgtact
ctaaagtacgtaccaccaatccctggtaaagatatcgtattaaacctagatatcaaactt
caaaaatttgttgaaaagcaactggatggacgcagaggttctgccattgtacttgaccct
aaaaccagtgcagttttagctatggtttcaagtccaagctacgatccaaacttatttgta
catggtatttcaagtaaaaattacagcgctttattaaatgaccctgatcgtccactagtt
aacagaagtacattaggtatctatccaccagcatcaaccgtaaaaccatttatcgctgtt
tctgcattaaaagagaaaattgttaccacagaaacaacccgtgatgatcctggttattgg
cgcataccgaactctaaaactaaaccatttagagactggaagcgttggggtcacggtaca
gttaacttaaaacaatcgattgaagagtctgttgataccttcttctatcaaatcgcctat
gatatgggcattgatagattatcaagttggatgatgaaatttggttttggtgattacacc
ggtattgatattcgtgaagaaagtaaagcgaatatgcctactcgagaatggaaagttgct
cgtttccgtaccccatggtaccaaggcgatactatccctgtaggtattggtcaaggctac
tggacagcaacgccaatgcagcttgcaaaagcaacggctgtattaaccaatcatggcaaa
gttcaagcaccacatttattaaaagggattattgaaaataataaagaagtgccttatgaa
ccagagccttacccaccaattgaaggggtaaaagacagttactggcaattagctattgat
ggcatgattctagtaaataatggacgtaaaggtacagcaagacgagcttttgctggcaca
ccttatgtaagtgctggtaaatcaggtacatcgcaagtattcggtctaaaagaagatgaa
gaatataatgcagatgaaattgcagaacacttacgtgaccacgctttatttaccggtttt
gcaccagcaaaagatccaaaagttattatttctctcgtattagagaatggtggtggtggc
tctagccaaggtggtccaatagctcgtcacgtcttcgattatgtattactaccgaaaacg
gaagaggcagctaagaagtaa
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