Aliivibrio fischeri MJ11: VFMJ11_0859
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Entry
VFMJ11_0859 CDS
T00754
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
vfm
Aliivibrio fischeri MJ11
Pathway
vfm00020
Citrate cycle (TCA cycle)
vfm00190
Oxidative phosphorylation
vfm00650
Butanoate metabolism
vfm00720
Other carbon fixation pathways
vfm01100
Metabolic pathways
vfm01110
Biosynthesis of secondary metabolites
vfm01120
Microbial metabolism in diverse environments
vfm01200
Carbon metabolism
Module
vfm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vfm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vfm_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
VFMJ11_0859 (sdhA)
00650 Butanoate metabolism
VFMJ11_0859 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
VFMJ11_0859 (sdhA)
00720 Other carbon fixation pathways
VFMJ11_0859 (sdhA)
Enzymes [BR:
vfm01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
VFMJ11_0859 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
GIDA
Thi4
BEX
FAD_binding_3
OPA3
Lycopene_cycl
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
ACH65963
UniProt:
B5FC24
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All DBs
Position
I:889097..890866
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AA seq
589 aa
AA seq
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MSSIPVREFDAVVIGAGGAGMRAALQISEQGLSCALLSKVFPTRSHTVSAQGGITVALGN
AHEDHWEQHMYDTVKGSDYIGDQDAIEYMCKNGPESVIELEKMGLPFSRFDNGTIYQRPF
GGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNIKHKTTIFSEWYALDLVKNEDGAILG
CTALCMETGEVCYFKSKATILATGGAGRIYASTTNAHINTGDGVGMAIRAGVPMQDIEMW
QFHPTGIAGAGVLVTEGCRGEGGYLLNKDGERFMERYAPNAKDLAGRDVVARSMMVEIRE
GRGCDGPWGPHIKLKLDHLGKETLESRLPGVCELSRTFAHVDPVKEPIPVIPTCHYMMGG
VPTQVSGQAIKQDESGADVEVQGLFACGEIASVSVHGANRLGGNSLLDLVVFGRATGLHL
GETLKKQAEAKPATEEDIQRSLERYNRWENSTGGEDPAQIRKDLQQCMQNNFSVFREGDA
MAKGLEELKVIRERLNNAYLSDKSTEFNTQRIECLELENLMETAFATAVAANYRTESRGA
HARFDFPERDDANWLCHSIYNPETESMSKRNVNMEPVHREAFPPKARTY
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
gtgagtagtattcctgttagagaatttgatgccgttgtaatcggtgctggtggtgcgggt
atgagagccgcgctgcaaatttcagaacaaggcctttcttgtgctttgttatcaaaagtt
tttccaactcgttctcacactgtatctgcccaaggtggtattaccgttgctcttggtaat
gcgcatgaagatcattgggaacaacatatgtatgatacggtgaaaggttctgattatatc
ggtgaccaagatgcgatcgaatacatgtgtaaaaatggtccagagtcggttatcgaacta
gagaaaatgggcttgccattctcacgttttgataatggtacgatttatcaacgtccattt
ggcggtcaatctaagaactttggcggcgaacaagctgctcgcactgctgctgcggcagac
cgtactgggcatgcgcttcttcatacgctttaccaacaaaatattaagcataaaacgacg
attttttctgagtggtatgcgcttgatttagtaaaaaatgaagacggtgccattttagga
tgtactgctctttgtatggaaaccggtgaagtttgttactttaaatccaaagcaacaatt
ctggctactggtggtgctggacgtatttacgcttcaacaaccaatgcacatattaatact
ggtgatggtgttggtatggcgattcgagctggtgttccaatgcaagacattgaaatgtgg
cagttccacccaacaggtatcgccggtgctggtgttcttgtaactgaagggtgtcgtggt
gaaggtggttatcttttaaataaagatggtgaacgcttcatggaacgttacgcaccaaat
gctaaagatttggcaggtcgtgatgtggtagctcgttcaatgatggttgaaattcgcgaa
ggtcgtggttgtgatggtccttggggtccacacattaaattgaaattggatcacctaggt
aaagagacgcttgaatcacgcctaccgggtgtgtgtgagttatctcgtacctttgctcat
gttgacccagtaaaagaacctattccagtgattcctacttgtcattacatgatgggtggc
gtaccaactcaggtttctggccaagccatcaagcaagatgaaagcggtgctgatgttgaa
gttcaaggcttgtttgcttgtggtgaaattgcgtcagtttcagtacatggtgctaaccgt
ttaggtggtaactctttgcttgatttagtggtgtttggtcgtgcaacagggcttcaccta
ggcgagacactgaaaaagcaagcagaagcaaaaccagcaactgaagaagatattcagcgt
tcactagagcgttataatcgttgggaaaatagcacgggtggtgaagacccagctcaaatc
cgtaaagacttacaacagtgtatgcaaaataacttctcggtattccgtgaaggtgatgca
atggcaaaaggtcttgaagagctaaaagtgattcgtgagcgtctaaacaatgcgtatcta
tccgataaatcgacagagtttaatactcagcgtattgaatgtttagagctagaaaacttg
atggaaacggcatttgcaaccgcagtagcagcaaattatcgtacagaaagtcgtggagct
cacgcacgcttcgatttccctgagcgtgatgatgctaattggttatgccattcaatttac
aaccctgagacagagtcaatgtctaagcgtaatgtaaatatggaacctgttcaccgtgaa
gctttccctccgaaagctcgtacatattaa
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