Aliivibrio fischeri MJ11: VFMJ11_0918
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Entry
VFMJ11_0918 CDS
T00754
Name
(GenBank) ribosomal small subunit pseudouridine synthase A
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
vfm
Aliivibrio fischeri MJ11
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vfm03009
]
VFMJ11_0918
Enzymes [BR:
vfm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
VFMJ11_0918
Ribosome biogenesis [BR:
vfm03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
VFMJ11_0918
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF7382
TruB_N
Plk4_PB1
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
ACH66075
UniProt:
B5FCH9
LinkDB
All DBs
Position
I:957938..958642
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AA seq
234 aa
AA seq
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MRLDKFLCETLGATRKEATRIIKSGTVTVDGVKTKVTSVKVTDDSTVEWDGRELKFHGPR
YIMLFKPDGYVCSHEDSTHPSALSLLDEVNLEKLHFAGRLDVDTTGLVLITDDGQWSHKI
TSPKRKCAKTYRVWLADPIGADYAEKLEAGIQLKSEKDLTMPAVMEIVDEEEHELLLTIH
EGKYHQVKRMFAALGNKVEGLHRAQIGGLGLDYSLEPGEYRYLTEEEVEAVFGE
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttagataaatttttgtgcgaaacattaggtgccactcgtaaagaagcaactcga
atcattaaaagtggtacggttactgttgatggcgtgaaaacaaaagtaacatctgtaaaa
gtaacagatgattcaacagttgaatgggatggacgtgaactgaaattccatggtcctcgc
tacattatgctatttaaacctgatggttatgtatgttctcatgaagacagtacgcaccca
tctgcactctctttattagatgaagtgaatcttgagaagctgcattttgcaggccgtctt
gatgtagacactaccggtttagtacttattacggatgacggtcaatggtcacataagatc
acttctccaaaacgtaagtgtgcgaaaacataccgtgtatggcttgctgatccaattggt
gctgattacgctgagaaattggaagcgggcattcagcttaagagcgaaaaagatctaacg
atgccagcagtaatggaaattgttgatgaagaagaacacgaacttctattaactatccat
gaaggtaaataccaccaagttaagcgtatgtttgcagctttaggtaataaagttgaaggt
ttacaccgtgctcaaatcggtggtttaggtctggattattctctagaaccaggtgagtac
cgttacttaactgaagaagaagttgaagcggtatttggcgaataa
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