Aliivibrio fischeri MJ11: VFMJ11_0939
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Entry
VFMJ11_0939 CDS
T00754
Symbol
cydD
Name
(GenBank) ABC transporter, CydDC-E family, permease/ATP-binding protein CydD
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
vfm
Aliivibrio fischeri MJ11
Pathway
vfm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VFMJ11_0939 (cydD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vfm02000
]
VFMJ11_0939 (cydD)
Transporters [BR:
vfm02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
VFMJ11_0939 (cydD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
RsgA_GTPase
AAA_29
AAA_7
AAA
AAA_22
AAA_23
nSTAND1
MMR_HSR1
AAA_16
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ACH67193
UniProt:
B5FCK0
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All DBs
Position
I:complement(984006..985778)
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AA seq
590 aa
AA seq
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MDKIQQRELGKWLKGQSKLAKKWLTLSIGLGFLSSLFLIAQAALLADILHQLIVEQVDKY
ELISHFVAILVFVAIRALCSWGREIAGYRCGEHIRVHIRQLILNKLQELGPAYIKGKPAG
TWATLLLEQVEDMQDFFSRYLPQMSLSVLIPFVILIVVFPQNWAAGLIFLLTAPLVPLFM
ALVGMGAADANRRNFKALQRLSGHFYDRLQSMTTIRLFNKTAQETEHLHGASEIFRKRTM
EVLRLAFLSSAVLEFFTSISIAIVAVYFGFTFIGELDFGHYGTTVTLFTGLFILILAPEF
YQPLRDLGTFYHAKAQAIGAAESLVEFLDTKTEQQAQGDKKVSESSTLDIQVEELIVTTH
DGKNLLGPISFHLEEGSQTALIGPSGAGKTSLINAILGFLPYQGSIKINGIELSELDKTE
WYKEINWVGQNPTLVHGTIQENITLGKQDITQEQLDTACEHAFANEFIADLGYQHAISDR
SGGLSVGQAQRLALARALLQQGRLWILDEPTASLDAKSERLVMKSLNQATQGLTTLMITH
RLDQLHAMDSILVLDKGKIVQSGSFDEIKDSGLFANMLAAKQPVQGDLDA
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatacaacaacgcgagttaggtaaatggctcaagggtcaaagcaagcttgca
aaaaaatggctaaccctctctatcgggctcggctttctttccagtctttttcttattgct
caagcggcattacttgccgatattctgcaccaattaatcgtagaacaagtcgataaatac
gaactgatttcgcactttgttgctatcttagtgtttgttgctattcgtgccctttgcagt
tggggacgagagattgcaggttaccgatgtggtgagcacattcgagtacacattcgacag
ttaattttgaataaactgcaagaattaggtcctgcttatatcaaaggaaaacctgctggt
acatgggcaaccttattacttgaacaagttgaagacatgcaagacttcttctctcgctac
cttccacaaatgtctctatcggttttaattccgtttgttatattaatcgtggtgttccct
caaaactgggctgccgggttaatctttttgcttaccgctccgttagttccattatttatg
gcactggttggtatgggagctgcagatgctaaccgacgaaattttaaagcattgcaacgt
ttatctggtcatttttatgatcgtctgcaatcaatgacaaccatacgcttattcaataaa
acagcacaagaaactgaacacttacatggtgcttcggaaattttccgtaaacgtactatg
gaagtactgagactggcattcttatcgtcagctgttctagagttttttacttcaatttca
attgctattgttgcggtttacttcggttttacttttattggtgagctagatttcggtcat
tacggaacaaccgtcactctgtttactggtctattcattcttattcttgctccagagttc
tatcagccactccgtgatttaggtaccttctatcacgccaaagcacaagcgatcggtgct
gcagaatcgctggttgaatttctagacaccaaaacagaacagcaagctcaaggtgataaa
aaagtctctgaatcttcaaccctcgatattcaagttgaagagttaatcgtaacgactcac
gatggaaaaaacctcttaggccctattagttttcatctagaagaaggctctcaaactgca
cttattggccctagtggtgctggtaaaacgagtttgattaatgccattcttggcttcctt
ccatatcaaggaagtatcaaaattaatggcattgaattatcagagttagataaaactgaa
tggtataaagaaatcaactgggtcggtcaaaatccaacattggttcacggtactattcaa
gaaaacatcaccctaggtaagcaagacattactcaagaacaactagatacggcatgtgag
catgcattcgctaacgagtttattgctgatcttggttatcaacatgcgatttctgatcgt
tcaggcggtttatctgtaggacaagcacagcgactggcattagcaagagcattattgcaa
caagggcgtttatggatcttagatgaaccaacagcaagtcttgatgcaaaaagtgaacgt
ttagtaatgaagagcttaaatcaagcgactcaaggcttaactacattaatgatcactcac
cgcttagatcaactgcatgcaatggactctatccttgtattagataaagggaaaatagtt
caatctggctcatttgatgagataaaagattctggcctatttgcgaatatgctagcggca
aaacaaccagtgcaaggtgatctcgatgcgtga
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