Aliivibrio fischeri MJ11: VFMJ11_1242
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Entry
VFMJ11_1242 CDS
T00754
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vfm
Aliivibrio fischeri MJ11
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vfm03400
]
VFMJ11_1242
DNA repair and recombination proteins [BR:
vfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VFMJ11_1242
Archaeal homologous recombinant proteins
VFMJ11_1242
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
DDR
FBPase_2
PRORP
Motif
Other DBs
NCBI-ProteinID:
ACH66971
UniProt:
B5FDP8
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All DBs
Position
I:1311891..1313135
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AA seq
414 aa
AA seq
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MRILHTSDWHLGQNFFTKSRRNEHQQFITWLLEQVQKNAINAVIIAGDVFDTGAPPSYAR
EMYNQFVVEMNKVNCELIVLGGNHDSVSTLNESKQLLAHLNARVIANTCDDLSTQLLTLP
DSDGTVGAILCAVPFIRPRDVVTSIAGSTGVEKQQALGEAIKQHYHQLYQKALELRKELN
VEVPIIATGHLTALGVKQSDSVRDIYIGTLDGFAADGFPPADYIALGHIHRPQLVAKSEH
IRYSGSPIPLSFDELKSQKQVVMVEFDKQSVIQIAPINVPMFQQMKALKGDLETIEKELA
QFQECEETTWLCIEVEVQDYLSDLQQRIQALTQDLNVEVLQLRRARNRSEQTLTQEKTET
LAELTPFDVFTKRIEQETFETEKEQQRAERMTVKFKQILSEVEHKDTDPQEGDA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattttacatacttcagattggcatttaggtcaaaatttcttcacaaaaagtcgt
cgtaatgaacatcaacaattcattacatggttacttgagcaagtacaaaaaaatgccata
aatgcggtcattattgctggagatgtgtttgatacgggtgcaccgccaagttacgcgcgt
gaaatgtataaccaatttgtggtggagatgaataaagtaaactgtgagttgattgtgctt
ggtggaaatcatgattcagtttcaacgctaaatgaatcaaaacaattattggctcatttg
aacgctcgagtgattgccaatacctgtgatgatttatccacccaattattaacgcttcca
gacagtgatgggacggttggtgctattttatgtgcggttccttttattcgcccgcgtgac
gttgtcactagtatcgcaggctcaacgggtgtagaaaagcaacaagcactcggtgaagcg
attaaacaacattatcatcagctgtatcaaaaagcactcgagttacgaaaagagttaaat
gtagaagtccctattattgcgacaggccatttaaccgcgttaggggtaaaacaatcggat
tctgttcgcgatatttatatcggtacgcttgatgggtttgcagcagatggtttcccgcct
gcggattatattgcattgggtcatattcatcgcccgcaattggtggctaaatctgaacat
attcgttattcaggctcacccattccattaagttttgatgagcttaaatctcagaaacaa
gtggtgatggttgagtttgataaacaaagcgtcattcaaattgcgccaattaatgtgcct
atgtttcaacaaatgaaggcattaaagggcgatttggaaaccatcgaaaaagagttagct
caatttcaagagtgtgaagaaacgacttggttatgtattgaagtagaagtacaagattac
ctttccgatctacaacaacgcattcaggcgctaactcaagatcttaacgttgaggtgctg
caattgcgtcgagcaagaaatcgcagtgaacaaacgttaacacaagaaaaaacagaaacc
ttagctgaactaacgccttttgatgtgtttactaaacgtatagagcaagagacgtttgag
acagaaaaagagcagcaacgagctgaaagaatgacagtgaaattcaagcaaattctgtca
gaagtagaacataaagatacggatccacaagaaggtgatgcatga
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