Aliivibrio fischeri MJ11: VFMJ11_1283
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Entry
VFMJ11_1283 CDS
T00754
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vfm
Aliivibrio fischeri MJ11
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vfm03032
]
VFMJ11_1283 (gyrA)
03400 DNA repair and recombination proteins [BR:
vfm03400
]
VFMJ11_1283 (gyrA)
Enzymes [BR:
vfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VFMJ11_1283 (gyrA)
DNA replication proteins [BR:
vfm03032
]
Prokaryotic type
DNA Topoisomerases
VFMJ11_1283 (gyrA)
DNA repair and recombination proteins [BR:
vfm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VFMJ11_1283 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
THF_DHG_CYH
Motif
Other DBs
NCBI-ProteinID:
ACH66882
UniProt:
B5FDT9
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Position
I:1359055..1361691
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AA seq
878 aa
AA seq
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MSDLAKEITPVNIEDELRGSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMDVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMAKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGSSGIAVGMAT
NIPPHNLTEVVNGCLAFIENEEITIDELMNYIPGPDFPTAALISGRKGIVDAYKTGRGKV
YMRSKANIEADKNGKETIIVTEIPYQVNKARLIEKIAELVKDKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYSLTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREV
VTRRTIFELRKARDRAHILEGLALALANIDEIIELIRNAPTPAEAKEGLISRGWDLGNVA
SMLERAGTDAARPDWLEPEFGIREGKYFLTEQQAQAILELRLHRLTGLEHEKILDEYKAL
LDEIAELMHILASTERLMEVIRDELVMVRDMYGDERRTEIGAAIHDIDMEDLITQEDVVV
TLSREGYVKYQILSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDNILCFSTRGKAYS
LKVFQLPQASRTARGKPIVNILPLEEGERITAILPVSEYSEDKFIFMATGDGTVKKTSLD
QFAKVRANGLIAVNLREDDSLIGVDITDGSSEIMLFSKAGKVVRFNEEQVRGMGRTASGV
RGMKLSGEDQVVSLIVPSNEGDILTVTQNGYGKRTVLSEYPAKSRATQGVVSIKVSERNG
SVVGAVQAEDGDEFMMITDAGTLVRTRVSEVSQVGRNTQGVTLIRTSENENVVALQRIDE
VEEAEIIEGEEGEVTEATVTTEATETPQADTDAESTEE
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatcttgctaaagagatcacgcccgtaaatattgaagatgagcttcgaggttct
tacctagactatgcgatgtcagtaatcgttggtcgtgctcttcccgatgtgcgtgatggc
ctaaaaccagtacaccgccgcgttttattcgcaatggatgtactaggtaatgattggaat
aaaccatataaaaaatctgcccgtgttgttggcgatgtaatcggtaaatatcaccctcat
ggtgatagtgctgtttatgacaccatcgtacgtatggcgcaaccgttctcactacgctat
atgctagttgatggccaaggtaactttggttctatcgatggtgactcagcggcggcgatg
cgttataccgaagttcgtatggcgaaaatcgctcacgaactgttggctgacctagataaa
gaaactgtagattatgttcctaactatgatggtacagaacagatccctgcagtattacca
acaaagatcccgaacctacttgtaaatggttcatcgggtatcgcggttggtatggcaaca
aacatcccaccacacaacttaacagaagtggtaaatggttgtttggctttcatcgaaaat
gaagaaatcacgatcgatgagctaatgaactatatcccaggtcctgacttcccgacagct
gcattgatcagtggtcgtaaaggcatcgttgatgcttataagacaggtcgtggtaaagtt
tacatgcgttctaaagcaaatatcgaagccgacaaaaatggtaaagaaaccattattgtt
actgagatcccttatcaagttaacaaagctcgcttgatcgaaaagattgctgagctagtt
aaagataagaaagtagaaggcatttcagcactacgtgacgaatctgataaagatggtatg
cgtattgttattgaatgtaagcgtgatgcagtaggtgaggttgttcttaataacctttac
tctctgactcaacttcaaactacattcggtatcaacatggttgcactagataatggtcaa
ccaaaactattcaacctgaaagaaatgttgaagtgtttcgttgatcaccgtcgtgaagta
gtaactcgccgtactatttttgaattacgcaaagcgcgtgatcgtgctcatatccttgaa
ggtttagcactagcattagcgaacatcgatgaaatcatcgaattgatccgtaatgcacca
acaccagcagaagcaaaagaaggtctaatctcacgtggttgggatttaggtaacgttgct
tcaatgctagagcgtgctggtactgatgctgctcgtcctgattggttagagccagagttt
ggtattcgtgaaggtaaatacttcttaacagaacaacaagctcaagcaattctagaactt
cgtctacaccgtttaactggtttagagcacgagaagattttagatgaatacaaagcacta
ttagatgaaatcgcagagctaatgcatattcttgcaagcactgaacgtctaatggaagtg
atccgtgacgaattagttatggttcgcgacatgtacggtgatgagcgtcgcactgaaatt
ggtgcagcgatccatgacatcgacatggaagacctaattacacaagaagatgttgtcgta
acactttctcgtgaaggttatgttaagtaccaaattctaagcgattacgaagcacaacgt
cgtggtggtaaaggtaagagtgcaactaagatgaaagatgaagacttcatcgagcgtcta
cttgttgcgaatactcatgataatatcctttgtttctctacacgtggtaaagcgtatagc
ttgaaagtgttccaattacctcaagcaagtcgtactgctcgtggtaagccaatcgtaaac
attcttcctctagaagaaggtgagcgtattacagcgattctaccagtatctgaatactct
gaagataagtttatctttatggcaacaggtgatggtactgttaagaaaacatcactagat
caatttgcaaaagttcgtgcaaacggcttaatcgcagtaaatctacgtgaagatgattca
ctaatcggtgttgatatcactgatggttcaagtgaaatcatgctgttctctaaagcaggt
aaagtggttcgtttcaacgaagaacaagttcgtggtatgggccgtacagcttctggtgtt
cgtggtatgaaactgtctggtgaagatcaggttgtttcgttaatcgttccttctaatgaa
ggcgatatcttaacagtgactcaaaatggttacggtaaacgtactgttctttctgagtac
cctgcgaagagccgtgcaacgcaaggtgttgtatctatcaaagtttctgaacgtaacggc
agtgttgtcggtgcagttcaagctgaagatggcgatgaattcatgatgatcactgacgca
ggtacgctagtacgtactcgtgtatcagaagttagccaagtgggtcgtaatactcaaggt
gtaacattgatccgtacttctgaaaatgaaaatgtagttgcactgcaacgcattgatgaa
gttgaagaagctgaaatcattgaaggcgaagagggtgaagtaacagaggcaacagtaaca
actgaagcaactgagactcctcaagctgataccgatgctgagagcacagaagaataa
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