Aliivibrio fischeri MJ11: VFMJ11_1811
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Entry
VFMJ11_1811 CDS
T00754
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
vfm
Aliivibrio fischeri MJ11
Pathway
vfm03030
DNA replication
vfm03430
Mismatch repair
vfm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VFMJ11_1811
03430 Mismatch repair
VFMJ11_1811
03440 Homologous recombination
VFMJ11_1811
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vfm03032
]
VFMJ11_1811
03400 DNA repair and recombination proteins [BR:
vfm03400
]
VFMJ11_1811
Enzymes [BR:
vfm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VFMJ11_1811
DNA replication proteins [BR:
vfm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VFMJ11_1811
DNA repair and recombination proteins [BR:
vfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VFMJ11_1811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_4
AAA
RuvB_N
AAA_22
AAA_5
AAA_14
ResIII
AAA_2
AAA_16
AAA_30
AAA_19
TsaE
AAA_18
nSTAND3
TniB
AAA_7
PIF1
Mg_chelatase
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
ACH65748
UniProt:
B5FFM6
LinkDB
All DBs
Position
I:complement(1921443..1923572)
Genome browser
AA seq
709 aa
AA seq
DB search
MSYQVLARKWRPHHFKDVVGQPHVLTALENALDHNRLHHAYLFSGTRGVGKTTIARLFAK
GLNCEEGITSTPCGVCSTCKEIDEGRFVDLLEIDAASRTKVEDTRELLDNVQYKPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFLLATTDPQKLPVTILSRCLQFHLKHISV
DQIHEQLDFVLDKEEVSKEARALGLIAHAADGSMRDALSLTDQAIALGNGSVTAEIVSAM
LGTLDTDQAIRILEAISTKNMQTLMNCVNDLADIGVEWDGLAKELANQLHKLAMYQALPA
TLDKTQPDAERIELLSTQLSPQEVQLFYQIVLQSRKDLPLAPNERTGAEMMLLRMVAFRP
VHAQALEAQPIAVPSTEPQAINTAPRVQQQAPSVPANVAPQAQRPMTSQQRPTMQQQTQQ
GHAPANVPPMHSEQPPMYDAPPMGTPSGESASQAPQQSSSAQPPMQETPAPRSGLLGVRN
QLRSAKNNLTNTGTGSKKASAASDKKKTSSVLERIAEKQHLAPRAQVSQIGNSATQEKKP
EEPYRWKSTQPEMKKVVSDVTPTKLKQALEHEKTPEMVKLLVEESSKQDTWSALAMSLTL
PKLVQQLVLNSAFVEQDNQIKLHLRAAQSHLNGDKANELITQALTQTLNREVTITIDISD
EGTTPLELREQMYQTKLQTAYQSLQQDPHVNFFIQRFGAEMDQESVRPI
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaagtattggcacggaagtggcgaccacatcattttaaagatgttgttggc
caacctcatgtgcttactgcgttggaaaacgcacttgaccataatcgacttcatcacgct
tatctatttagcggaacacgtggtgtgggtaaaaccacgattgcgcgtttatttgctaaa
ggtttgaactgtgaagaagggatcacatcaacaccgtgtggtgtgtgttctacatgtaaa
gaaatcgacgaaggacgttttgttgatttacttgaaatcgatgctgcttctagaacgaaa
gtggaagatacacgtgaactattagataacgttcaatacaagcctgcgcgtggtcgcttt
aaggtttatttgatcgatgaagttcatatgttatctcgccacagtttcaatgccttatta
aagacattggaagagccgcctgaatacgtaaaattcttactagcaacaacggatccacag
aaattacctgtaacgatcctttctcgctgtttacagtttcaccttaagcacatcagtgtg
gaccaaattcatgagcagttagactttgttcttgataaagaagaagtctcaaaagaagct
cgggctcttgggcttattgctcatgccgctgacggtagtatgcgtgatgcattaagttta
accgatcaagctattgcgcttggtaacggttcagtgacggctgaaattgtatcggcaatg
ctcggaaccttagataccgatcaggcaattcgtattctagaggcgatcagcactaagaat
atgcagacactcatgaattgcgtaaatgatcttgccgatattggtgttgaatgggatgga
ttagcgaaagagttagctaatcagcttcataaattagctatgtatcaagcgttgcctgca
actctagataaaacacagccagatgctgaacgtattgagcttttaagtacacaattatct
cctcaagaagtgcaattgttttatcaaattgtactgcaaagccgtaaagacttgccatta
gctccaaatgagcgaaccggtgctgagatgatgttattgagaatggtagcattccgtccc
gtacacgctcaggcattagaagcacagccaattgcggtgccatcaacagaacctcaagca
atcaatacggcaccaagagtgcagcaacaagccccttcagttcctgctaatgttgcacct
caagcacagagaccaatgacgtctcaacaacgtcctacaatgcaacagcaaacgcagcaa
ggtcatgcgcctgcgaatgtaccaccaatgcattctgagcaaccaccaatgtatgatgcg
cctcctatgggaacgccgtcaggtgaatctgcgtcacaagcacctcaacagtcttcttca
gcgcagcctcctatgcaagagacgccagccccacgaagtggactattaggtgttcgtaac
caattgcgtagtgcaaaaaacaatttaaccaatacaggtactggctcaaaaaaggctagt
gcggcatccgataagaaaaaaacgagttcagtgttagagcgtattgctgaaaagcaacat
ttagcgcctcgtgctcaggtgtcgcaaattggaaattccgcaacacaagagaaaaaacca
gaagagccgtatcgctggaaatcaactcaaccagaaatgaaaaaagtggtgagtgatgtt
actccaacgaaactaaaacaagcgctagagcatgaaaaaacgcctgaaatggtgaaattg
cttgttgaagagtcatcaaaacaagatacttggtctgctttagcaatgtcattaacatta
ccaaagttagtacagcagcttgttttaaattcagcatttgttgagcaagataaccaaatt
aagttacatttacgagcagctcaatcgcatttaaatggcgacaaagccaatgagctgatc
actcaagcgctaacacaaacattaaatcgagaagtgacgataacaatcgatattagtgac
gaaggaacaactcctttagagctgcgtgagcaaatgtatcaaactaaattgcaaacggct
tatcagagtttgcagcaggatccacacgtcaatttctttattcagagatttggtgcagag
atggatcaagaaagtgtgagacctatttaa
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