Aliivibrio fischeri MJ11: VFMJ11_1861
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Entry
VFMJ11_1861 CDS
T00754
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
vfm
Aliivibrio fischeri MJ11
Pathway
vfm03030
DNA replication
vfm03430
Mismatch repair
vfm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VFMJ11_1861
03430 Mismatch repair
VFMJ11_1861
03440 Homologous recombination
VFMJ11_1861
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vfm03032
]
VFMJ11_1861
03400 DNA repair and recombination proteins [BR:
vfm03400
]
VFMJ11_1861
Enzymes [BR:
vfm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VFMJ11_1861
DNA replication proteins [BR:
vfm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VFMJ11_1861
DNA repair and recombination proteins [BR:
vfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VFMJ11_1861
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
Sey1_3HB
TraI_hel_assoc_N
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ACH66502
UniProt:
B5FG33
LinkDB
All DBs
Position
I:complement(1979942..1980925)
Genome browser
AA seq
327 aa
AA seq
DB search
MATKLYPWQTSLWQQWQQLIQNDRLPHAILCAMPIGAGREALVQYFADTLLCLTQGIEPC
GFCHSCELIKSQTHPDLHWIKPETEGKSISVEQIRQCNSWALESSQFNAKRVIIIDPAEK
MTESAANALLKTLEAPPKNCQFVLLADSPHQLLPTIRSRCQVWHQSKIDAESITIWLKET
ENLSVSMQSIALNDSLPLAVKSFYQDKKQALHKQLLSDFESCVKSDFCQTADIVKTVLKL
ESEGLTWLSYLLADIQKRQMGIMQPWVHCDEIKLIESLAKTLSSNVVYKQYIALNSLQEQ
LDSFPGLNKELLLTQWMFEFTGELSVN
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggctactaaactttatccttggcagacaagcttatggcaacagtggcagcagttgatt
caaaatgatcgacttcctcatgctattttatgcgctatgcctataggtgcgggaagagaa
gcattagttcagtattttgctgatacgctattgtgtttaacgcaaggtattgaaccttgt
ggtttttgtcatagttgcgagttaattaaatcacaaacgcaccctgatctgcattggata
aaaccagaaactgaaggtaaatctatttcagtggaacaaatacgccaatgtaattcatgg
gctttagagtcctcacaattcaatgctaagcgtgtgatcatcattgatcctgcagaaaaa
atgacagaatctgcagctaatgcattacttaagacattagaggcaccaccgaaaaattgt
caatttgtattgttggccgattcacctcatcagttattaccaacaatacgtagtcgttgt
caggtatggcatcaatcgaaaattgatgctgaatctattacaatttggcttaaagaaact
gaaaacctttcagtatcaatgcagtctattgctttgaatgactcactcccattagcagtg
aaaagcttttatcaagataagaaacaagcattacataaacagctactttcagactttgaa
tcctgtgtgaaaagtgatttttgccagactgctgatatagttaaaactgttctaaaactt
gaaagtgaaggcttaacttggctaagttacttacttgctgatattcagaagagacagatg
ggaataatgcagccttgggttcattgtgacgaaataaagctcatagaaagcttagcgaaa
acattatcgagtaatgtggtctataagcaatacattgcactgaattcgttacaagagcaa
ttggatagtttccctggtttaaataaagaattactactaactcaatggatgtttgagttt
actggagagttgagtgttaattga
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