Aliivibrio fischeri MJ11: VFMJ11_2186
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Entry
VFMJ11_2186 CDS
T00754
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
vfm
Aliivibrio fischeri MJ11
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vfm03009
]
VFMJ11_2186 (rumA)
Enzymes [BR:
vfm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
VFMJ11_2186 (rumA)
Ribosome biogenesis [BR:
vfm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VFMJ11_2186 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
TRM5-TYW2_MTfase
PCMT
RrnaAD
Methyltransf_11
MTS
Methyltransf_23
Cons_hypoth95
DOT1
Ubie_methyltran
Methyltr_RsmB-F
Methyltransf_15
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
ACH67211
UniProt:
B5FAG4
LinkDB
All DBs
Position
I:complement(2326613..2327929)
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AA seq
438 aa
AA seq
DB search
MAQFFKPKKKASVNTKHLSVDVVRLDHNGAGIAFVDKKPVFIEGALPGEKAIIQFIEQKK
QFSRAKLIKLAQKSEKRQTPICQHYHECGGCNLQHLQHEEQIVAKNEKLQELMKKQGVSQ
GEMVQPIMGEELSYRRRARISLMINKQTNQLDFGFRKKQSKAIVNVRHCPVLVQELDQHL
ESLFTLLNQLKGKKNLGHVELVQADNGSVLLIRHVADFNEKDHQALVNYCEERNLILYLM
PEADVLNHVRGEEPFYLIDGTKIYFTPKDFIQVNRKVNEQMVEQALSWLDLNENDSVLDL
FCGLGNFSLPLAKKVKTVVGIEGVDDMVQRAKLNAERNHLSNVSFYQANLEEEASDQVWA
STKFTKILLDPARAGAAGVMETVAKLKPQTVVYVSCNPATLARDSQLLIQHGFKLTRLGM
LDMFPHTGHLESMALFER
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattcttcaaaccgaaaaagaaagcttctgtaaatacaaaacatctatcagtt
gatgtggttcgattagatcacaacggagctggaattgcttttgttgataagaaacccgtg
tttattgagggagcattgcctggtgaaaaagcgatcattcagtttattgagcaaaagaag
caattttctcgtgcaaaactgatcaagttagcgcagaaaagtgaaaagcgccaaacaccg
atttgtcagcattatcatgaatgtggtgggtgtaatttacagcatctacaacatgaagaa
caaattgtagcgaaaaatgaaaagctacaagaactgatgaaaaagcaaggtgtctcacaa
ggtgagatggttcagcctattatgggtgaagaactaagttaccgtcgtcgagctcgcatc
agcttaatgattaataaacaaaccaatcagcttgatttcggttttcgtaaaaaacagagt
aaggcaattgtaaatgttcgccattgccctgttcttgttcaagagttagatcaacattta
gagtcattatttactttattaaaccagttaaaaggtaagaaaaacctaggtcatgttgag
cttgtacaggcagataatggcagtgttttacttattcgtcatgtggcagattttaatgag
aaggatcaccaagcattagttaattattgtgaagaacgcaatttaatcctatacctaatg
cctgaagcggatgtattaaatcatgttcgtggagaagaaccattttatcttattgatgga
accaaaatttattttacgccgaaagatttcattcaagtaaatcgcaaagtcaatgagcaa
atggttgagcaagccttatcttggttagacttaaatgaaaacgacagcgtattggatcta
ttttgtgggttaggaaactttagtctgccattagctaaaaaagtaaaaacagtagtgggg
attgaaggggttgatgacatggttcaacgtgcaaaattgaacgccgaaagaaatcatctt
tctaatgtgtcgttttatcaagctaacttagaagaagaggctagcgatcaagtgtgggct
agcacaaagtttacaaaaattttactggatcctgccagagcaggggctgcaggtgtgatg
gaaactgtggcaaaattaaagcctcaaaccgtggtttatgtttcgtgcaacccagcaaca
cttgcgcgcgatagccaattacttattcaacacggtttcaagcttactaggctaggtatg
cttgatatgttccctcatacagggcatttggaatctatggcattgtttgaacgttaa
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