Aliivibrio fischeri MJ11: VFMJ11_2315
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Entry
VFMJ11_2315 CDS
T00754
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vfm
Aliivibrio fischeri MJ11
Pathway
vfm00470
D-Amino acid metabolism
vfm00550
Peptidoglycan biosynthesis
vfm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VFMJ11_2315 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
VFMJ11_2315 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vfm01011
]
VFMJ11_2315 (murD)
Enzymes [BR:
vfm01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
VFMJ11_2315 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vfm01011
]
Precursor biosynthesis
Amino acid ligase
VFMJ11_2315 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
NAD_binding_9
NAD_binding_7
DAO
3Beta_HSD
HcgC
Motif
Other DBs
NCBI-ProteinID:
ACH65909
UniProt:
B5FB37
LinkDB
All DBs
Position
I:complement(2485302..2486624)
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AA seq
440 aa
AA seq
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MSGFGGVKNVVVVGLGMTGLSVVKHLLRQPEALTIKVIDTRDTPPGHDQLPENVELHSGG
WQQDWLINADLIVTNPGIALASPQLKPAIDKGIQIVGDIELFAWAVNAPVIAITGSNGKS
TVTDLTGEMAKAAGVKTAVGGNIGFAALDLLEQDAELYVLELSSFQLETTSTLKLKAAAF
LNLSEDHMDRYQGMADYRQAKLRIFDHAEVCIVNRDDKQTYPDVEKTLKSFGFDQGDYGC
IEKDGIEYLAKDAMSLLAANELGLVGKHNIANSLVAIALLDAVGINLDATLDTLRTYNGL
THRCQVVADNNGIRWVNDSKATNVASTLAALSGLQLEGKLHLLVGGVGKGADFSELSPAL
HDLNLMMYCFGEDGDQFVSLDPRSLLCETMDEAVATLYPTLNKGDMVMLSPACASFDQYA
NFMARGDAFTQLAKQYSIES
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagtggttttggtggtgtaaaaaatgttgtagtagttggcttaggtatgacaggttta
tctgttgttaagcatttactaagacaaccagaagcgttaacaattaaagtgattgatact
cgtgatacaccgccaggccatgaccaattgcctgaaaatgtagaactgcattctggagga
tggcagcaagattggttgattaatgctgatttgattgtaacgaatcctggaatcgcctta
gcgtcacctcaacttaagcctgcgattgataaaggaattcaaattgttggtgacatcgag
ttatttgcttgggcggtgaatgcgcctgttattgcgatcactggctcgaatggcaaaagt
acggtgaccgatctaactggggaaatggcaaaagcggctggagtaaaaacagccgttggt
ggaaatattggttttgcagctcttgatttattagagcaagatgcagaactttatgttctt
gagctttcgagtttccaacttgaaacaacatccacattaaagctgaaagccgctgctttt
cttaatctgtctgaagatcatatggatcgttatcaaggcatggcggattatcgtcaagct
aagctacgtatctttgatcatgcagaagtatgcattgttaatcgtgacgataaacaaact
taccctgatgttgagaaaacattaaaaagctttgggtttgaccaaggtgattatggctgt
attgaaaaagatggcattgagtatttagctaaagatgcaatgtcattgcttgctgcaaat
gaattaggattagtcggaaagcacaatattgcaaacagtctagttgcaattgcattactt
gatgccgttggtatcaatttagatgcaacattagatacattaagaacttacaatggattg
acacatagatgccaagttgtcgcagataataatggcattcgctgggtcaatgattcaaaa
gcgacaaatgtagcaagtacattggcagccttatctggtttacagcttgaaggtaaatta
cacctacttgttggtggtgtaggtaaaggtgctgatttttcagaattatcaccagcgctg
catgatttaaatttaatgatgtactgctttggtgaagatggtgatcaatttgtatcactt
gatcctcgttcactcttatgtgaaaccatggatgaagccgttgctactctatacccaact
ttaaataaaggcgatatggtgatgctatctccagcatgtgcaagcttcgaccaatacgca
aattttatggctagaggggatgcattcacccagttagcaaaacagtattcaattgagagt
taa
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