KEGG   Aliivibrio fischeri MJ11: VFMJ11_2339
Entry
VFMJ11_2339       CDS       T00754                                 
Symbol
parE
Name
(GenBank) DNA topoisomerase IV, B subunit
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
vfm  Aliivibrio fischeri MJ11
Brite
KEGG Orthology (KO) [BR:vfm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vfm03032]
    VFMJ11_2339 (parE)
   03036 Chromosome and associated proteins [BR:vfm03036]
    VFMJ11_2339 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:vfm02048]
    VFMJ11_2339 (parE)
Enzymes [BR:vfm01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     VFMJ11_2339 (parE)
DNA replication proteins [BR:vfm03032]
 Prokaryotic type
  DNA Topoisomerases
   VFMJ11_2339 (parE)
Chromosome and associated proteins [BR:vfm03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    VFMJ11_2339 (parE)
Prokaryotic defense system [BR:vfm02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    VFMJ11_2339 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim TOPRIM_C HATPase_c_3 PelD_GGDEF
Other DBs
NCBI-ProteinID: ACH67237
LinkDB
Position
I:complement(2510650..2512530)
AA seq 626 aa
MTEQYNAGAIEVLNGLEPVRRRPGMYTDTVRPNHLGQEVIDNSVDEALAGHAKKVEVILH
ADQSLEVIDDGRGMPVDIHPVEKVSGVELILCKLHAGGKFSGKNYEFSGGLHGVGISVVN
ALSKRVEVTVRRDGQVYEIAFEHGDKVSDLTVTGTCGRRNRGTSVHFWPDASYFDSAKFS
VTRLINNLKAKAVLCPGLEIVFKDKVNDKEHNWCYEDGLKDYLLEGVTGFTLLPEIPFTG
AFSGTGEAADWAVTWLPEGGELVAESYVNLIPTAQGGTHVNGMRQGLLDAMREFCEFRNL
VPRGVKLTADDIWDRCAYVLSVKMQDPQFAGQTKERLSSRQCAAFVSGVVKDAFSLWLNE
KPQIAEQLAEACIANAHRRMRAAKKVVRKKIASGPALPGKLTDCSVQDLARTELFLVEGD
SAGGSAKQARDREFQAVMPLRGKILNTWEVSADQVLASQEVHDISVALGIDPDSDDLSGL
RYGKVCILADADSDGLHIATLLCALYLKHFKALVQAGHVYVAMPPLYRIDCGKEVFYALD
EEEKEGVLDRLSNKRAKINVQRFKGLGEMNPLQLRETTMDPNTRRLVQLTIDDDEQTDEM
MDMLLGKKRADDRRAWLQSNGDQAEV
NT seq 1881 nt   +upstreamnt  +downstreamnt
atgactgaacaatataatgcaggagccattgaggttctaaatggccttgagcccgttcgt
cgccgtcctggtatgtataccgacactgtccgtccaaaccatttgggccaagaagttatt
gataacagtgtcgatgaagccctagccggacacgcgaaaaaagttgaagtaattttacat
gccgatcaatcacttgaagttattgatgatgggcgtggtatgcctgttgatatccaccca
gtagaaaaagtatctggcgttgaacttattttgtgtaagttacatgctggtggtaaattc
tcaggtaaaaactacgaattctcaggtggcttacacggggttggtatctctgtagtaaat
gccttgtcaaaacgagttgaagtaacggttcgtcgtgatggccaagtgtatgaaattgca
tttgaacacggtgataaagtatcagatttaactgtaacgggcacttgtggtcgtcgtaac
cgtggtaccagtgttcatttctggcctgatgcgagctattttgactccgcaaaattctct
gttactcgccttatcaataatttaaaagctaaagcagtactttgtcctggcttagaaatt
gtttttaaagataaagttaacgataaagaacacaactggtgttatgaagacggtcttaaa
gattatcttcttgaaggtgtaactggttttacattattaccagaaattccatttactggt
gctttttctggcactggtgaagcggcagattgggcggtaacttggctaccagaaggcggt
gagctagttgctgaaagttatgtaaaccttattcctacagcacaaggtggtacgcacgta
aatggcatgcgccaaggtcttcttgatgcaatgcgtgagttctgtgagttccgtaacctt
gttcctcgtggcgttaagttaactgctgatgatatttgggaccgttgtgcctacgtatta
tcggtgaaaatgcaagacccacaatttgcaggtcaaactaaagagcgtttatcttcacgt
cagtgtgcggcgtttgtttctggtgtggtaaaagacgcatttagcttatggttgaatgag
aagccacaaatcgcagaacaacttgctgaagcatgtattgcgaacgcgcaccgtcgtatg
cgtgctgctaaaaaagtggttcgtaagaaaatcgcttcaggtccagctcttccgggtaag
ttgaccgattgttctgttcaagatttagctcgtaccgaactgttcttagtggaaggggac
tcggcgggtggttctgctaaacaagctcgtgatcgtgagttccaagcggttatgccactg
cgtggtaaaattttgaatacatgggaagtatcagctgaccaagtattagcatctcaagaa
gtacatgatatctctgttgctttgggtattgaccccgactctgatgacttatctggtttg
cgttacggtaaagtatgtatccttgccgatgctgactccgacggtcttcatatcgcaacc
ctgttatgtgcactttatctaaaacacttcaaagcattagttcaagctggccacgtttat
gttgccatgcctcctttgtatcgtattgattgcggtaaagaggtgttctacgcacttgat
gaagaagaaaaagaaggcgtattagaccgtctaagcaataagcgcgcaaaaattaacgta
cagcgatttaaaggactgggtgagatgaatccacttcaattgcgtgaaacgacgatggat
ccaaatacacgccgtcttgttcagttaacgatcgatgatgatgaacaaactgatgaaatg
atggatatgcttttaggtaagaaacgtgcagacgatcgtcgtgcttggctacaatctaac
ggcgatcaggcagaggtataa

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