Aliivibrio fischeri MJ11: VFMJ11_2451
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Entry
VFMJ11_2451 CDS
T00754
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
vfm
Aliivibrio fischeri MJ11
Pathway
vfm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
VFMJ11_2451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vfm03019
]
VFMJ11_2451
03009 Ribosome biogenesis [BR:
vfm03009
]
VFMJ11_2451
Messenger RNA biogenesis [BR:
vfm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
VFMJ11_2451
Ribosome biogenesis [BR:
vfm03009
]
Eukaryotic type
Pre-60S particles
RNases
VFMJ11_2451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ACH65787
UniProt:
B5FBS0
LinkDB
All DBs
Position
I:complement(2629147..2629692)
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AA seq
181 aa
AA seq
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MAINDQNLIWVDLEMTGLDPETHKIIEIASIVTDAQLNILAEGPVIAIHQPEEELAKMDD
WCTNTHTNSGLVARVQESKYNEEAAIAETIAFLEQWVPKGVSPICGNSIGQDRRFLYKHM
PTLEEYFHYRYVDVSTIKELARRWKPEVLDGFTKAGTHLALDDIRESIAELKYYRQHIFT
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atggcaattaatgatcaaaacctgatttgggtggatttagagatgacaggattggatcct
gaaactcataaaatcatcgaaattgcatctattgtgacagatgcacaactgaatatttta
gcagaaggtccagtaattgcgatccatcagccagaagaagagttggctaaaatggacgat
tggtgtaccaatactcatacaaatagcggattagtcgctcgagtacaagaaagtaaatac
aatgaagaagcggcaattgcagaaactattgcttttcttgagcaatgggttccaaaaggc
gtatcaccaatttgtggtaatagtattggacaagatcgtcgttttttatataagcacatg
ccaacattagaagagtattttcattaccgctatgttgatgtaagtacaattaaagagcta
gctcgtcgatggaaacctgaagttttagatggttttaccaaagcaggtacacatttagcg
ttagatgatattcgcgaatctattgcagaattgaagtattatcgccaacatattttcaca
atttaa
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