Aliivibrio fischeri MJ11: VFMJ11_2573
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Entry
VFMJ11_2573 CDS
T00754
Symbol
rpoH
Name
(GenBank) alternative sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
vfm
Aliivibrio fischeri MJ11
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vfm03021
]
VFMJ11_2573 (rpoH)
Transcription machinery [BR:
vfm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VFMJ11_2573 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
GntR
Motif
Other DBs
NCBI-ProteinID:
ACH67336
UniProt:
B5FCB9
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All DBs
Position
I:complement(2757498..2758358)
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AA seq
286 aa
AA seq
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MSKEMYSMAVVSQDSIDSYLRSVNSYPMLTVAEERELAERLHYKEEIEAAKELILSHLRF
VVHVARGYSGYGLPLADLIQEGNVGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKNKKRLGWFNNGEVEAVAKDLGVAPSEVREMEARLAAQDS
TFEAPAEDDDRDMAFTAPVYYLEDKQSDVAYSLEEDNWEDYTNNRLANAIATLDERSQHI
VQSRWLADEKATLQELADTYQVSAERIRQLEKNAMKKLKDAVGDVL
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagaaatgtattcaatggctgtcgtttcacaagatagtatcgatagctatcta
cgatctgttaatagttacccaatgttaactgtggcagaggaacgtgagctagcggagcgt
ttacactacaaagaagaaatagaggcagcgaaagagctgatcctatctcatcttcgtttc
gtcgtacatgttgcccgtggttattcaggttacggtctacctttggcggatcttattcaa
gaaggtaacgtaggcttaatgaaagcagtaaaacgttttaaccctgaagtgggtgtgcgt
ttggtgtcttttgctgtgcactggattaaagctgaaattcatgagtacgtattgagaaac
tggcgtattgtgaaggtagcaacgaccaaagcacaacgtaaattgttttttaatttaaga
aagaataaaaaacgtttaggttggtttaacaacggtgaagttgaagcggttgcaaaagat
cttggtgttgcaccgtctgaagttagagagatggaagcacgacttgctgctcaagactca
acgtttgaagctcctgctgaagatgacgaccgtgatatggcgtttactgcaccagtttac
tacctagaagataagcaatcagatgttgcttactctttagaagaagataactgggaagat
tatacaaataatcgtttagcaaatgcgattgcgacgttagatgagcgtagtcagcatatt
gttcaatctcgttggttagctgatgagaaagcgacactgcaagagttagcggatacttat
caagtatcggcggagcgtattcgtcaacttgagaagaatgcgatgaaaaaattgaaggat
gccgttggcgacgttctttaa
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