Aliivibrio fischeri MJ11: VFMJ11_2608
Help
Entry
VFMJ11_2608 CDS
T00754
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
vfm
Aliivibrio fischeri MJ11
Pathway
vfm00300
Lysine biosynthesis
vfm00470
D-Amino acid metabolism
vfm01100
Metabolic pathways
vfm01110
Biosynthesis of secondary metabolites
vfm01120
Microbial metabolism in diverse environments
vfm01230
Biosynthesis of amino acids
Module
vfm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
VFMJ11_2608 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
VFMJ11_2608 (dapF)
Enzymes [BR:
vfm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
VFMJ11_2608 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ACH67332
UniProt:
B5FCR0
LinkDB
All DBs
Position
I:complement(2791814..2792599)
Genome browser
AA seq
261 aa
AA seq
DB search
MVVDCLTQNIFFSPDLIRRLADRHRGIGFDQLLVVEAPYDPETDFHYRIFNADGSEVEQC
GNGARCFARFVRMKGLTNKTSISVSTKKGKMILKVEDDDQITVNMGEPVFEPNKIPFKAT
QAEKTYLLRVDDKTLFSGAVSMGNPHCVTVVDDVDAYDVDKYGPLVESHERFPERVNAGF
MQIISPNEVKLRVYERGAGETQACGSGACGAVAVGIMQELLGEEVKVSLPGGDLYIVWQG
SGKPLFMTGPATHVYDGQLSI
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggttgttgactgtctgacacagaatattttcttttctccagacctgatccgtcgtttg
gctgatcgccatcgtggtattggatttgatcagttattggtggttgaagccccttatgat
cctgaaacggattttcattaccgaatttttaatgctgatggctcggaagtagagcagtgt
ggtaatggtgcacgttgtttcgctcgatttgtacgaatgaaagggttaaccaataaaacc
agcatttcggtcagtactaagaaaggcaaaatgattttgaaagtggaagatgatgaccaa
attacggtgaacatgggtgagcctgtatttgagccaaataagattccatttaaagcaacg
caagctgaaaaaacctatttattgcgtgttgatgataaaaccttattcagtggcgcagta
agtatgggaaatcctcactgtgtgaccgttgtcgacgatgttgatgcttatgatgttgat
aagtatggaccgttagtggaaagccatgaacgctttcctgagcgtgtaaatgccggcttt
atgcaaatcatctcaccaaatgaagtgaaattacgcgtttatgaacgtggtgctggtgaa
actcaagcttgtggtagcggtgcttgtggtgcggttgctgttggtattatgcaagaatta
ttgggtgaggaagtgaaagtgtctttacctggtggtgatttgtacatcgtatggcaagga
tcaggaaaaccattatttatgacaggccctgcaacacacgtatacgatggtcaattatca
atatga
DBGET
integrated database retrieval system