Aliivibrio fischeri MJ11: VFMJ11_A0028
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Entry
VFMJ11_A0028 CDS
T00754
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vfm
Aliivibrio fischeri MJ11
Pathway
vfm03030
DNA replication
vfm03430
Mismatch repair
vfm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VFMJ11_A0028
03430 Mismatch repair
VFMJ11_A0028
03440 Homologous recombination
VFMJ11_A0028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vfm03032
]
VFMJ11_A0028
03400 DNA repair and recombination proteins [BR:
vfm03400
]
VFMJ11_A0028
Enzymes [BR:
vfm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VFMJ11_A0028
DNA replication proteins [BR:
vfm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VFMJ11_A0028
DNA repair and recombination proteins [BR:
vfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VFMJ11_A0028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ACH64215
UniProt:
B5ESD9
LinkDB
All DBs
Position
II:36360..36998
Genome browser
AA seq
212 aa
AA seq
DB search
MSLINSKEAAPAHTVVVLDFETTGLSPNQGDRAIEIGAVKLENGVVVDRFQGLMNPGFRV
SSFIENYTGISNRMLADAASCDEVMNEFANFIQGCNLVAHNASFDKRFLDGELALIQREY
DGDFACSLLVSRRLTQEASSHKLGDLVAYHQIENDGVFHRALADAEVTASLWLVLLETLE
REHGIVNPSFELMMKIGKTPKASIANFLKKNR
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcattaactctaaagaagcggcaccagcacatactgtcgttgtactcgatttc
gaaactactggtttatctccaaatcaaggggatcgtgcaatcgagattggtgctgttaaa
ttagaaaatggtgtggtggttgatcgctttcaaggtttaatgaatccggggtttagagtc
agttcatttatagagaactacacgggtatttctaatcgtatgcttgcagatgcagccagt
tgtgatgaagtaatgaatgagtttgccaactttattcaaggttgcaatctggttgctcat
aatgcttcgtttgataagcgctttttagatggtgagttagcgttaatccagcgtgaatat
gatggggattttgcttgttcactattagtttctagacgattaactcaagaagcatcatcg
cataaattaggtgatttggtcgcttatcatcaaattgagaatgatggtgtatttcaccga
gcattagctgatgctgaggttacggcatcattatggctggtattattagagacgttagaa
agagagcacggaatagtaaatccaagctttgaattaatgatgaagataggtaaaacacct
aaagcatccatagctaactttttgaaaaagaatcgctag
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