Aliivibrio fischeri MJ11: VFMJ11_A0285
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Entry
VFMJ11_A0285 CDS
T00754
Name
(GenBank) putative formate dehydrogenase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
vfm
Aliivibrio fischeri MJ11
Pathway
vfm00630
Glyoxylate and dicarboxylate metabolism
vfm00680
Methane metabolism
vfm01100
Metabolic pathways
vfm01120
Microbial metabolism in diverse environments
vfm01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VFMJ11_A0285
09102 Energy metabolism
00680 Methane metabolism
VFMJ11_A0285
Enzymes [BR:
vfm01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
VFMJ11_A0285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Pyr_redox_2
Fer4_20
Molybdop_Fe4S4
Fer2_4
Pyr_redox
Pyr_redox_3
Fer4_7
Fer4_6
NAD_binding_8
Fer4
Fer4_8
Fer4_10
Fer4_9
Fer4_2
DAO
Fer4_15
FAD_oxidored
HI0933_like
FAD_binding_2
Fer4_21
Thi4
NAD_binding_7
NADH-G_4Fe-4S_3
Lys_Orn_oxgnase
Fer4_3
Fer4_4
Fer4_16
Fes1
Fer4_18
MVP_shoulder
Motif
Other DBs
NCBI-ProteinID:
ACH63654
UniProt:
B5ET24
LinkDB
All DBs
Position
II:321507..325670
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AA seq
1387 aa
AA seq
DB search
MMKITIDKQTFTIDEEITLLAAAKECNVEIPSLCGNNINGEKVPCDLCVVEIEGQGIQRA
CETQAVDGMQVITSSEALVKRRQSALNKILSDHYADCEAPCQTACPAGVDIQSYLYHISQ
NDHQKAIEVIKRTLPMPLSIGRVCPAFCEAECRRGLVDEPLAIRQLKRHAADVDLHAQES
YVPPKKADKGKSIAVIGSGPGGLTCGYYLTNEGYSVTAFESMPKAGGWLRYGIPEYRLPK
SILDKEIELMCRNGMEIQTSVKLGEDFSLTQLSDEYDAVCLAVGASKAVEMHYQGSELGG
CYLGVDYLKDYVTESKLTTGKKVAVIGGGNTAIDCARTAVRDGADTTLIYRRTREEMPAE
DYEVVEAEHEGVKFHFLTNPVENIADENGRVTQVRLEKMALGEPDASGRRSPQATGEFFI
EEFDTVISAVSQKPDLSFLENDTIDLPLTRWNTADANSLTMHSGVKNIFSIGDFRRGPAT
AIEAVADGRIAAEAIDRFFNGNMEKIPTKPFNSQKEKKTKQVDPRHFEHIQKAMRVIMPE
LTAEQREQSFDEVETGFDNLDAIREAERCLECACQANTNCGLRDYATEYKADETDLSNEG
KQKFAIDTSSEFIVFDANRCISCGQCVEACNEKGVHGVLSFMKNEDGTNASRPECRAGFE
HGYQMGNSNCVQCGACVQACPVGALVDSRDKSQGRIEVLKPVDTICTYCGVGCKLTMMVD
ESTNKIKYVQGAKSSPVNEGMLCVKGRFGFDFVSSDERLKTPLIRKNGKLVPASWEEAIT
LVADKFSAIKSQHGGNALAGFSSAKTTNEDNYAFQKLVRREFETNNLDHCARLCHSTTVT
GLEASIGSGAMTNDIPSIKHSDLIFIIGSDTTSAHPIIASHIKQAIRHHGARLIVADPKQ
VDISDHAELYVAQRPGTDVMLLNGIMQQIIKNNWHDQTYIAERVEGFDELKAEVMSEAYS
PEKIELITGVKAQDVIEMARYIGTAKRTAIYYSMGITQHTTGHDNVRSIANLQMLCGNIG
IEGGGINPLRGQSNVQGACDMGALPTDFPGYQKVENPAVYEKFVKAWNKPTLPSKKGLTL
TEIIDAACHEQVKGLFVMGENPVLSDPDQAHVIHGLEKLDFLVVQDIFMTETAAYADVIL
PSCSFAEKAGHFTNTERRVQRILPAVNPPGEAKEDWWIIQEIANAMGGEWNYQSVEDITE
EITQVTPQYQGMHWDAIGKNGLQWPCNDANPQGTRIMHNQQFLRGKGQMAAVPFRYAAEL
PDEEYPLVLTTGRLLEQYHTGTMTRKTKGLNNLAGPRAMMSVADAERLGISNSEMVRVST
RRGTIEAPAFVTKRMQEGVIFVPFHFVEAAANKLTTTALDPHAKIPEFKVAAVKVEKVLQ
PEPEVCV
NT seq
4164 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaataactatagataaacaaacattcactatcgatgaagagataacactttta
gcagctgcaaaggaatgcaatgtcgaaatcccttcactatgcggaaacaatatcaatggt
gagaaagtaccatgtgatttatgtgtagttgaaattgaaggtcaaggaattcaacgcgct
tgtgaaactcaagctgttgatggtatgcaagtgatcacttcgtctgaagcgttagtaaaa
cgtcgtcaaagtgcattaaacaaaattctttcagatcattacgctgattgtgaagcgccg
tgccaaactgcgtgcccagctggcgtagatatacagtcatatctgtaccatatttcacaa
aatgatcatcaaaaagccattgaagtcattaaacgaacattgccaatgccattatctatt
ggtcgtgtttgtcctgcgttctgtgaagcggaatgtcgtcgtggtttggttgatgagcca
ttagctattcgtcaattaaaacgtcatgcggctgatgtggatctacatgctcaagaatct
tatgtgccaccaaagaaagcagacaaaggaaaatccattgctgtgattggtagtggtccg
ggtggattaacctgtggttattacctgactaatgagggttacagtgtaacggcatttgag
tcgatgcctaaagcaggcggttggctacgttatggtattcctgaatatcgtttaccaaaa
tcgattttagataaagaaatcgaattgatgtgtcgtaacggtatggaaattcaaacttct
gtgaaactcggtgaggatttctcattaacacagttaagtgatgagtatgatgctgtctgt
ttggcagtcggtgcttcaaaagccgttgaaatgcattatcaaggcagtgagcttggtggt
tgttatttaggagttgattacttaaaagattacgtaacagaatctaaattaacgacaggt
aaaaaagtagcggttattggtggtggtaacacggcgattgactgtgctcgtacagcggtg
cgtgatggtgccgatacaacgcttatttatcgtcgtactcgtgaagagatgccagcagaa
gattatgaagtggttgaagctgaacacgaaggtgttaaattccatttcttaaccaacccg
gttgaaaatattgctgatgaaaatggacgagtaactcaagttcgcttggagaaaatggca
ttaggtgaacctgatgcatctggtcgtcgtagtcctcaggcaaccggtgaatttttcatt
gaagagtttgatactgtaatttctgcggtatcacaaaaaccggatttaagctttttagag
aacgatacgattgatttgccactgactcgttggaataccgctgatgcaaacagtttgaca
atgcacagtggtgtgaaaaatatttttagcatcggtgattttcgtcgtggtcctgcaacg
gcaattgaagcggttgctgatggtcgtattgctgcagaagcgattgatcgtttctttaac
ggtaacatggagaaaattccaactaaaccgtttaattctcaaaaagagaagaagactaag
caagttgatcctaggcattttgaacatattcaaaaagcaatgcgcgtcatcatgcctgag
ttaaccgctgagcagcgtgagcaaagctttgatgaagttgaaacgggttttgataattta
gatgcgattcgtgaagctgagcgttgcttagagtgtgcatgtcaagctaacaccaattgt
gggctgcgtgattatgcaacggaatataaagcggatgaaacggatttaagcaatgaaggt
aaacagaagtttgctatcgataccagttctgaatttattgtttttgatgccaaccgttgt
attagttgtggtcaatgtgttgaagcgtgtaacgaaaaaggcgtgcatggcgtcttaagc
ttcatgaaaaatgaagacggaaccaatgcctctcgtcctgaatgtcgtgcagggtttgag
cacggttatcaaatgggtaactcaaactgtgtgcaatgtggtgcgtgtgttcaagcgtgt
cctgttggcgcattggttgattctcgtgataaatctcaaggtcgaatcgaagttttaaaa
ccggttgatacgatttgtacctattgtggtgtgggttgtaagttaaccatgatggttgat
gaatcaacaaacaaaattaaatacgttcaaggcgctaaatcgtctccagtgaacgaaggc
atgctgtgtgttaaaggtcgctttggttttgattttgtcagcagcgatgagcgcttaaaa
acaccgttaattcgtaaaaatggtaagttagttcctgcaagttgggaagaggcgatcaca
ttagtagctgataagttcagcgccattaaatctcaacatggcggtaatgcgctagctgga
ttctcgtcggcaaaaaccaccaatgaagataactacgcattccaaaaattagtacgtcgt
gagtttgaaaccaataaccttgatcactgtgcacgcttatgtcactcaacgacagtaacg
ggcttagaagcgtctattggtagtggggcaatgaccaatgatattccaagtattaaacat
tctgatctgatctttattattggttcagatacgacatctgctcacccgattattgcttct
cacattaaacaagccatccgtcatcacggtgctcgcttaattgttgcggatccaaagcaa
gtggatatttctgatcatgctgagctgtatgtagcacaacgtccgggtacggatgtgatg
ctacttaacggtattatgcagcagatcatcaaaaataactggcacgatcagacatacatc
gctgaacgtgttgaaggttttgatgaactaaaagcagaagtgatgtcagaggcgtactca
cctgagaaaattgagttaatcacaggcgtaaaagcacaagatgtgattgaaatggcacgt
tacattggtactgctaaacgtactgctatttattattcaatgggtattacgcagcatacg
acgggccatgataacgttcgatctattgctaacttacaaatgctgtgtggcaacattggt
attgaaggtggtggtattaatccacttcgtggccaatcaaacgtacaaggtgcgtgtgat
atgggagccttgccaacggacttccctggttaccaaaaagtggagaatcctgcagtttac
gagaaattcgtaaaagcgtggaataagccaacattgccaagtaagaaaggcttaacatta
acagaaatcattgatgccgcctgccatgaacaagtaaaaggtttatttgtcatgggtgag
aacccagtgttgagtgaccctgaccaagcacacgttattcacggtttagagaaattagat
ttcctagttgtacaagatatctttatgacagaaaccgccgcgtatgctgatgtgatttta
ccatcgtgctcatttgcagaaaaagcgggtcattttaccaatactgagcgtcgtgttcag
cgtatcttacctgcggtaaatcctccgggcgaagcgaaagaagattggtggatcattcaa
gaaattgccaatgcaatgggtggtgaatggaattatcaatcggttgaagatattacagag
gaaattactcaagtgacacctcagtaccaaggtatgcattgggatgccattggtaaaaat
ggacttcaatggccgtgtaatgatgcgaatccgcaaggcactcgaattatgcataatcag
caattcttacgtggtaaaggccaaatggcagcggttccatttagatatgcggctgagttg
cctgatgaagaatacccattagtgctcacaacgggtcgtctactagagcaataccacaca
ggtactatgacacgcaaaaccaaagggttgaacaaccttgctggtccgcgcgccatgatg
agtgtggcagatgctgagcgtttaggtatctcaaatagtgagatggttcgagtatcaaca
cgccgtggtacgattgaagctcctgcatttgtgactaagcgtatgcaagaaggggtgata
tttgttccgttccactttgtagaagcggcggcgaataaactgaccacaacagcgcttgat
cctcatgcgaagatccccgagtttaaagtcgcagctgtgaaggtagaaaaggtattacaa
ccagaacctgaagtctgcgtataa
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