Aliivibrio fischeri MJ11: VFMJ11_A0387
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Entry
VFMJ11_A0387 CDS
T00754
Name
(GenBank) DNA polymerase III, epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vfm
Aliivibrio fischeri MJ11
Pathway
vfm03030
DNA replication
vfm03430
Mismatch repair
vfm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VFMJ11_A0387
03430 Mismatch repair
VFMJ11_A0387
03440 Homologous recombination
VFMJ11_A0387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vfm03032
]
VFMJ11_A0387
03400 DNA repair and recombination proteins [BR:
vfm03400
]
VFMJ11_A0387
Enzymes [BR:
vfm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VFMJ11_A0387
DNA replication proteins [BR:
vfm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VFMJ11_A0387
DNA repair and recombination proteins [BR:
vfm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VFMJ11_A0387
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ACH63818
UniProt:
B5ETC4
LinkDB
All DBs
Position
II:complement(435316..436095)
Genome browser
AA seq
259 aa
AA seq
DB search
MPDKSLTNKNIITHMMELFSNRHPLHRLEEQRQALIEQNLELPNYLAHFLKAPYPSPKEN
SNDMAFTVVDFETSGLNPKTDHIVSIGWVHIINGVIKLNSAQHHIINEPISINAEDEGEE
RDHTARSLHHILPEQQKMGISLEKAMECFFSNLPSNILVVHGATIEQRFLEQFFLSLQLP
NLPMIWLDTLRIEQNTIQQNRYQRDFRLFSLRRQYKLPDYPAHHALVDAISTAELFLAQK
KRLFNQAIAPIGFLYQKSQ
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgccagataaatcattaacgaacaaaaatatcatcactcatatgatggaactattctct
aatcgtcatccattgcatcgcctagaagagcagagacaagcattaatcgaacaaaactta
gagttacctaattatttagcccattttcttaaagcaccttacccaagtcctaaagaaaac
agtaatgatatggcgttcaccgtagtggattttgaaacctcagggctaaatccgaaaacc
gatcatatcgtgagcattggttgggttcatattattaatggcgtaataaaactcaatagt
gcccagcaccatattattaatgagccaatctcaataaatgcagaagatgaaggtgaagaa
agagatcatactgcccgttcattgcatcacattttacctgagcaacaaaaaatgggtatt
tcactcgaaaaggcaatggagtgtttcttttcgaatttacccagcaatattcttgttgtt
catggagcaaccattgagcagcggtttttagagcaatttttcctttcactacaattgcca
aatttacctatgatctggctagatacccttagaattgaacaaaatacaattcaacagaac
cgctatcaaagagatttccgtttattttctctcaggcgtcaatacaagttaccagactac
cccgctcatcacgctttagtcgatgcaatttcaactgctgagctttttttagcccaaaaa
aaacgtctctttaatcaagcgattgccccaataggcttcctatatcaaaaatcccaataa
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