Aliivibrio fischeri MJ11: VFMJ11_A0411
Help
Entry
VFMJ11_A0411 CDS
T00754
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
vfm
Aliivibrio fischeri MJ11
Pathway
vfm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VFMJ11_A0411 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vfm03019
]
VFMJ11_A0411 (rhlE)
Enzymes [BR:
vfm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
VFMJ11_A0411 (rhlE)
Messenger RNA biogenesis [BR:
vfm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
VFMJ11_A0411 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
ERCC3_RAD25_C
AAA_19
Helicase_RecD
SRX
DUF4864
Motif
Other DBs
NCBI-ProteinID:
ACH64047
UniProt:
B5ETE8
LinkDB
All DBs
Position
II:466995..468251
Genome browser
AA seq
418 aa
AA seq
DB search
MSFASLGLTEQILTTVAELGFKEATPVQKQAIPLVLQGHDVLAGAQTGTGKTAAFGLPLI
QRLIESPIERHEESKVVRSLILTPTRELAQQVFDSLVSYTQNTELKVVVAYGGTSINVQK
ENLLGGADILIATPGRLLDHLHIKTITLNQAEYLVLDEADRMLDMGFIPDIKKILRKMPD
ERQTLFFSATFSKKVREIAYYMLNKPKEVQVTPTNSTADTVEQMVYPVDKHRKSELLAYL
IGSRNWQQVLVFTKTKQGSDELVKELKKDGIKAASINGDKSQGARLRALEEFKTGKVRAL
IATDVAARGLDIEQLECVINYELPFKAEDYVHRIGRTGRAGHTGKAISLMSMDEEYLLKA
IETLLDTRLPQEWLQGYEPDPNAPLKEDRPRQGRGRSSDKRKMKAKLKIHANRGKNKR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgcgtctctaggattaacagaacaaatcctaacaacggttgcagaattaggt
tttaaagaagcaactcccgttcagaaacaagctattccactggtattacaaggacatgat
gtactggctggagcacaaacaggaactggtaaaacagcagcatttggtctgccactgatc
caacgcttgattgaaagtccaattgaacgtcatgaagaatccaaagtggtgcgaagctta
attcttacgcctactcgtgaattagcacaacaagtttttgatagtttggtaagttacact
caaaataccgaattaaaggttgtagtggcatatggcggtacaagtattaatgtacaaaaa
gaaaacttgcttggtggggcagatatattaatcgccacgcctggacgtttattggatcac
ttacacataaaaaccatcaccttaaatcaagctgagtatttagtgttagatgaagctgac
cgtatgttagatatgggctttattccagatattaaaaagattctgcgtaaaatgcctgat
gaacgtcaaactctgtttttctctgcaactttcagtaaaaaagtaagagaaatagcttat
tacatgcttaataagcctaaagaagtacaggtgactccaacgaacagtactgctgatacg
gttgagcagatggtttacccagtagataaacatcgtaagagtgaactattggcttattta
ataggttcccgtaattggcagcaagtgttggtattcactaaaacaaaacaaggctctgac
gagttagtaaaagagctaaaaaaagatgggataaaagccgcttctattaatggagataaa
agccaaggagcacgcctgagagctttagaagaatttaagacaggtaaggttcgtgcatta
atagcaacagatgttgctgcgcggggtttagacatagaacaacttgaatgcgtgattaac
tatgaattgccatttaaggctgaagattatgtacaccgtataggacgtacgggtagagct
gggcatacgggtaaagctatctctttaatgagtatggacgaagagtatttattaaaggca
atcgaaacgttattagatacacgtttaccacaagagtggttacaaggatatgaacccgat
ccgaatgcgccattaaaagaagatcgtccaagacagggtcgcggccgttcttcagataaa
cgaaaaatgaaagcaaaattaaagattcacgcaaatcgtggaaaaaacaaacgataa
DBGET
integrated database retrieval system
