Vibrio furnissii: vfu_A00224
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Entry
vfu_A00224 CDS
T01680
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vfu
Vibrio furnissii
Pathway
vfu03420
Nucleotide excision repair
vfu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
vfu_A00224
03430 Mismatch repair
vfu_A00224
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vfu03400
]
vfu_A00224
Enzymes [BR:
vfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
vfu_A00224
DNA repair and recombination proteins [BR:
vfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
vfu_A00224
MMR (mismatch excision repair)
Other MMR factors
vfu_A00224
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
Speriolin_C
SseB_C
Motif
Other DBs
NCBI-ProteinID:
ADT85455
LinkDB
All DBs
Position
1:complement(242377..244551)
Genome browser
AA seq
724 aa
AA seq
DB search
MIDPSLLLDGLNDKQREAVAAPLENLLVLAGAGSGKTRVLVHRIAWLMSVEQASPFSIMS
VTFTNKAAAEMRGRIDELMMGSSSGMWNGTFHGICHRILRAHYLDAKLPEDFQIIDSDDQ
QRLLKRLIKAQNLDDKQWPARQVSWWINGKKDEGLRPAHIDAYRDPVTQTYLQLYTAYQD
ACDRAGLVDFAEILLRALELLRDNKHIREHYQARFKHILVDEFQDTNNIQYAWLRMMAGP
QSHVMIVGDDDQSIYGWRGAKVENIEKFTLEFPSVNTIRLEQNYRSTKTILEASNTLIAN
NTERMGKELWTDGNVGDPISVYSAYNELDEARFVVGKIKEWQDKGGILNDCAILYRNNAQ
SRVLEEALLQTGLAYRIYGGMRFFERQEIKDALSYLRLMNNRNDDTAFERVVNTPTRGLG
DKTLDTVRFAARDRGCTLWQASVQLLEEKVLTGRAASALSRFVELINALEDDSAEMSLHS
QTDHVIKTSGLFEMYQQEKGEKSKARIENLEELVTATRQFEKPEEADEMTMLTAFLTHAA
LEAGEGQADEFDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLC
YVGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPESCLDEVRMKAQVSRPASSGRF
SQSAVKENFNETGFTLGSRVLHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYAK
LEKV
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatccctctcttttacttgacggtttaaacgacaaacaacgcgaagcggtggcc
gcaccgctagaaaacctgttggtgctggcaggggccggtagtggcaaaacccgggtgctg
gtgcaccgcatcgcttggttgatgtcggttgaacaggcctcgccgttctccatcatgtcc
gtgacctttaccaacaaagcggcggcggaaatgcgcggccgtattgacgagctgatgatg
ggcagttcatctggaatgtggaacggcacgttccatggcatctgccatcgcattctgcgc
gcccattatctcgacgccaaactgccggaagattttcagatcatcgacagtgatgaccag
cagcgtctgttgaaacgcctgatcaaagcgcagaatctggatgataaacagtggccagcg
cgtcaggtgtcgtggtggattaacggcaaaaaagacgaaggattgcgtccggcgcacatc
gatgcgtatcgcgatccggtgactcaaacctacctacaactctacactgcgtatcaagat
gcctgcgaccgcgcgggactggtcgatttcgctgaaattttgctgcgcgcgcttgagctg
ctgcgcgacaacaaacacattcgcgaacattatcaggcgcgctttaagcacattctggtc
gacgaatttcaagacaccaacaacattcaatacgcgtggctacgcatgatggcggggccg
caatcgcacgtgatgatcgtgggcgatgacgaccagtcaatttacggctggcgcggcgcg
aaagtggaaaacatcgagaaattcacgctcgaatttccaagcgtgaataccattcgtctt
gagcagaactaccgctcgaccaaaaccattcttgaagcgtccaacaccctgattgccaac
aacaccgagcgtatgggcaaagagctgtggaccgatggcaacgtcggcgatccgatttcg
gtctactcggcgtacaacgagctggatgaagcacgttttgtggtcggcaaaatcaaagag
tggcaggacaaaggcggcattctcaatgactgcgccattttgtaccgcaacaacgcccag
tcgcgggtgctggaagaagccctgctgcaaaccggattggcgtaccgcatttatggcggc
atgcgcttcttcgaacgtcaggaaatcaaagatgcgctgagctatctgcgcctgatgaac
aaccgcaacgacgacaccgcctttgagcgcgtggtcaacacgcccacccgtggtctgggc
gataaaacgctggataccgtgcgctttgcggcgcgcgatcgcggctgcacgttgtggcaa
gccagcgtgcagttactggaagagaaagtactcacgggccgcgcggcctcggcactgagc
cgatttgttgaactgatcaacgcgctggaagatgacagtgccgagatgtcgctgcatagc
caaaccgaccatgtgatcaagacctcgggtctgtttgagatgtaccagcaggaaaaaggc
gagaaatccaaggcacgtattgagaacttggaagagctggtgaccgcaacgcgtcagttt
gaaaaaccggaagaagcggacgaaatgaccatgctgactgcgttcttgactcatgcggcg
ctggaagcgggtgaagggcaagcggatgaattcgacgatgccgtgcaactgatgacgcta
cacagtgcaaaaggtctggagttcccgttggtatttatggtcggcgtggaagagggcatg
ttcccgagccagatgtcggctgaagaagcggggcgcctcgaagaggagcgccgtctgtgc
tacgtgggcatgacccgggcgatgcagaagctctacatcacctacgcggaaatgcgccgc
ctgtatggacaggacaaataccacaagccatcgcgctttattcgcgagttaccggaaagt
tgccttgatgaagtgcgcatgaaagcgcaagtcagccgcccggccagcagcggccggttc
agccagagcgcggtaaaagagaacttcaacgaaaccggctttacccttgggtcacgtgtg
ctgcatccgaaatttggcgaaggcaccatcattaactttgaaggcagcggtccgcaaagt
cgcgtgcaggtcgcctttaacggcgaaggcatcaagtggctggtcacggcgtatgccaag
ttggaaaaagtctaa
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