Vibrio furnissii: vfu_A00312
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Entry
vfu_A00312 CDS
T01680
Name
(GenBank) DNA polymerase III, beta chain
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
vfu
Vibrio furnissii
Pathway
vfu03030
DNA replication
vfu03430
Mismatch repair
vfu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
vfu_A00312
03430 Mismatch repair
vfu_A00312
03440 Homologous recombination
vfu_A00312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vfu03032
]
vfu_A00312
03400 DNA repair and recombination proteins [BR:
vfu03400
]
vfu_A00312
Enzymes [BR:
vfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
vfu_A00312
DNA replication proteins [BR:
vfu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
vfu_A00312
DNA repair and recombination proteins [BR:
vfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
vfu_A00312
SSDB
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Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
DUF7989
Motif
Other DBs
NCBI-ProteinID:
ADT85539
LinkDB
All DBs
Position
1:complement(339483..340583)
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AA seq
366 aa
AA seq
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MKFTIERSHFIKPLQQVSGTLGGRATLPILGNLLLKVEDNQLSMTATDLEVELVSRVTLE
GDFEAGTTTVPARKFLDICRGLPDAAVITVVLEGDRVQVRSGRSRFSLATLPASDFPNIE
DWQSEVELSLTQGELRGLVEKTQFSMANQDVRYYLNGMLFEIDGSTLRSVATDGHRMAVS
QTELGADFANKQIIVPRKGVLELVKLLDALEQPVVLQIGSSNLRAEVNNFVFTSKLVDGR
FPDYRRVLPQNTNKTLQAGCDELRQAFSRAAILSNEKFRGVRVNLDGGEMRITANNPEQE
EAEEMLDVNFDGEAIEIGFNVSYVLDVLNTLRCDNVRVSMSDANASALIENVDDDSAMYV
VMPIRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttacgattgaacgtagtcacttcattaaaccactgcaacaagtctccggcacg
ttaggcgggcgagcaacgttgccgattttgggtaacttgctgctgaaagtggaagacaat
cagctctccatgaccgcgacggatctggaagttgaactggtcagccgcgtgacgctggaa
ggtgatttcgaagcgggcaccaccacggtgccagcgcgcaaattcctcgacatctgccgt
ggtctgccggatgcggcggtgatcacggtggtgctggaaggcgatcgcgtgcaagtgcgc
tcagggcgcagccgcttctctttagcaaccttacccgccagcgatttcccgaacattgaa
gattggcaaagcgaagtggaattgtcgctgacccaaggcgaattgcgtggcctggttgag
aaaacacagttttcgatggccaaccaagacgtgcgttactacctcaacggcatgctgttt
gaaattgacggcagcaccttgcgcagcgtggcgaccgatggtcaccgtatggcggtgtcg
caaaccgaactgggcgcagatttcgccaacaaacaaattatcgtaccgcgcaaaggggta
ctggaactggtgaaactgctggatgcgcttgagcaaccagtggtgctgcaaatcggcagc
tcaaacctgcgtgctgaagtgaacaactttgtgtttacttccaaactggttgatggccgt
ttcccggattatcgccgcgtattgccgcaaaataccaacaaaacgctacaagcgggctgt
gatgaattgcgccaagcgttttcgcgtgccgcgattctgtcaaacgagaaattccggggc
gtacgcgtcaatctggatggcggcgaaatgcgcattaccgccaacaacccagaacaggaa
gaagccgaagagatgcttgacgtcaacttcgacggcgaagcgatcgaaatcggttttaac
gtcagctacgtgctggatgtactcaacaccctgcggtgtgacaacgtgcgcgtctcgatg
tccgatgcaaacgccagtgcgctgattgaaaacgtcgatgatgacagcgccatgtacgtg
gtgatgcccatccgcttgtaa
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