Vibrio furnissii: vfu_A00545
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Entry
vfu_A00545 CDS
T01680
Name
(GenBank) DNA-directed RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
vfu
Vibrio furnissii
Pathway
vfu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vfu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
vfu_A00545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vfu03021
]
vfu_A00545
03400 DNA repair and recombination proteins [BR:
vfu03400
]
vfu_A00545
Enzymes [BR:
vfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
vfu_A00545
Transcription machinery [BR:
vfu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
vfu_A00545
DNA repair and recombination proteins [BR:
vfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
vfu_A00545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
AmiR_N
Motif
Other DBs
NCBI-ProteinID:
ADT85757
LinkDB
All DBs
Position
1:complement(567902..568174)
Genome browser
AA seq
90 aa
AA seq
DB search
MARVTVQDAVEKVGNRFDLVLIAARRARQMQTGGKDSLVPEENDKPTVIALREIEEGLIT
KDVLDARERQEQQEQEAAELAAVSSIVHNR
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtaactgttcaagacgctgttgaaaaagttggcaaccgtttcgacctagtt
ctgattgcggctcgccgcgctcgtcaaatgcaaactggcggtaaagactcactggtgccg
gaagagaacgataagccaacggttatcgctctacgcgaaatcgaagaaggtcttatcacg
aaagatgtgctagacgcacgtgaacgccaagagcagcaagagcaagaagcagcagaattg
gcagcggtgagcagcatcgtgcacaaccgttaa
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integrated database retrieval system
