Vibrio furnissii: vfu_A00602
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Entry
vfu_A00602 CDS
T01680
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
vfu
Vibrio furnissii
Pathway
vfu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vfu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
vfu_A00602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vfu03019
]
vfu_A00602
03110 Chaperones and folding catalysts [BR:
vfu03110
]
vfu_A00602
03029 Mitochondrial biogenesis [BR:
vfu03029
]
vfu_A00602
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vfu04147
]
vfu_A00602
Enzymes [BR:
vfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
vfu_A00602
Messenger RNA biogenesis [BR:
vfu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
vfu_A00602
Chaperones and folding catalysts [BR:
vfu03110
]
Heat shock proteins
HSP60 / Chaperonin
vfu_A00602
Mitochondrial biogenesis [BR:
vfu03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
vfu_A00602
Exosome [BR:
vfu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
vfu_A00602
Exosomal proteins of other body fluids (saliva and urine)
vfu_A00602
Exosomal proteins of breast cancer cells
vfu_A00602
Exosomal proteins of colorectal cancer cells
vfu_A00602
Exosomal proteins of bladder cancer cells
vfu_A00602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ADT85809
LinkDB
All DBs
Position
1:624326..625963
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKDVKFGNDARVKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGSPTITKDGVSVAREI
ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKALSVPCEDTKAIAQVGTISANSDVSVGNIIAEAMEKVGRDGVITVEEG
QALQDELDVVEGMQFDRGYLSPYFINNQEAGSVDLESPFILLVDKKVSNIRELLPVLEGV
AKASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
ISEEIGLELEKAVLEDLGQAKRVTITKENTTIIDGAGDEVAIQGRVTQIRQQIEDATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI
RAASKLTELTGDNEEQNVGIRVALRAMEAPIRQIAKNAGDEDSVVANNVKAGDGNYGYNA
ATGEYGYMIAMGILDPTKVTRSALQFAASVAGLMITTEAMVTDLPKKDAPAMPDMGGMGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgtaaaatttggtaatgacgctcgagttaaaatgctagaaggtgta
aacgttctggcggatgcagtaaaagttacccttggcccgaaaggccgcaacgttgttctc
gacaaatcttttggttcaccaaccatcaccaaagatggtgtatctgtggcgcgcgaaatt
gaactggaagacaaattccagaacatgggcgcacaaatggtgaaagaagtggcttctcaa
gccaacgacgcagcgggtgacggcacaacaaccgcaaccgtactggctcaggcgatcgtg
aacgaaggtctgaaagctgtggcggcgggcatgaacccaatggatctgaaacgcggcatc
gacaaagcggtgattgcagcggttgaagaactgaaagcgctgtctgtgccatgtgaagac
accaaagcgattgctcaggtcggcactatctctgcaaactcagatgtgagcgtgggcaac
atcatcgcagaagcgatggaaaaagtgggccgcgacggtgtgatcactgttgaagaaggt
caggcgctgcaagacgagctggacgtggtagaagggatgcagttcgaccgcggttacctg
tctccttacttcatcaacaaccaagaagcaggcagcgtggatctagaaagcccgttcatc
ctgctggttgacaaaaaagtatcaaacattcgcgaactgctgccagtcctagaaggcgtt
gcgaaagcctctcgtccactgctgatcgtggcagaagacgtggaaggtgaagcgttggct
actctggttgtgaacaacatgcgtggcatcgtgaaagttgcagccgtgaaagctccgggc
tttggcgatcgtcgtaaagcgatgctgcaagatatcgcgattctgactggcggtacggtg
atttctgaagagatcggtctggaactggaaaaagcagtgctggaagatctgggtcaagcg
aaacgcgtgaccatcaccaaagaaaacaccaccatcattgatggcgcaggtgatgaagtg
gcaattcaaggtcgtgtgactcagattcgtcaacaaatcgaagatgcaacgtcagattac
gacaaagaaaaactgcaagagcgtgttgcgaaactggcaggcggcgttgccgtgatcaaa
gtgggcgcagcgactgaagttgaaatgaaagagaagaaagaccgcgttgaagacgcactg
cacgcgactcgcgcagctgtggaagaaggcgtggttgcaggtggtggcgtggcactgatt
cgcgcagcatctaaactaactgaactgactggcgacaacgaagagcaaaacgtgggtatc
cgcgtggcactacgtgcgatggaagcgccaattcgtcaaatcgcgaaaaacgcgggcgac
gaagattcagtggttgcgaacaacgtgaaagcgggcgacggtaactacggttacaacgca
gcaactggcgagtacggctacatgattgccatgggtattctggatccaaccaaagtaacc
cgtagcgcactgcaatttgcagcgtctgtggctggcctgatgatcaccacggaagcgatg
gtgactgacctaccgaagaaagatgccccagcaatgcctgacatgggcggcatgggtggc
atgggcggcatgatgtaa
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