Vibrio furnissii: vfu_A00779
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Entry
vfu_A00779 CDS
T01680
Name
(GenBank) DNA-binding protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
vfu
Vibrio furnissii
Brite
KEGG Orthology (KO) [BR:
vfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
vfu03036
]
vfu_A00779
03400 DNA repair and recombination proteins [BR:
vfu03400
]
vfu_A00779
Chromosome and associated proteins [BR:
vfu03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
vfu_A00779
DNA repair and recombination proteins [BR:
vfu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
vfu_A00779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
Cas3-like_C_2
Ureidogly_lyase
Motif
Other DBs
NCBI-ProteinID:
ADT85982
LinkDB
All DBs
Position
1:788737..789144
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AA seq
135 aa
AA seq
DB search
MNELIKTLLNLRSLRAFARDLTMEQLEEAYGKFTTVIEERREEEAKIREEQAEKEAQLAA
IAKQITEQGLDVNALISALSSNKPAKTQAKRQPRPAKYKYTDASGQEKTWTGQGRTPAAI
QKALNNGQSLEDFAI
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacttattaaaacgttactcaatttgcgtagtcttcgtgcttttgctcgcgat
ttaaccatggagcagctagaggaagcatacggtaaattcactacagtgattgaagaacgc
cgagaagaagaggcgaaaatccgtgaggagcaagcggagaaagaagctcagttagcggcg
atagctaaacaaatcacggaacaaggtctggatgtgaacgcgttaatctcggccctttct
tcgaacaagcctgctaagacacaagctaaacgtcaacctaggcctgcgaaatataaatat
actgatgcttcaggtcaggaaaaaacctggacggggcaggggcgaacgcctgctgcgatt
cagaaagcattgaataatggtcagtccctagaggattttgcgatttag
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