Vibrio furnissii: vfu_A00942
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Entry
vfu_A00942 CDS
T01680
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vfu
Vibrio furnissii
Brite
KEGG Orthology (KO) [BR:
vfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vfu03016
]
vfu_A00942
Enzymes [BR:
vfu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
vfu_A00942
Transfer RNA biogenesis [BR:
vfu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
vfu_A00942
Prokaryotic type
vfu_A00942
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ADT86137
LinkDB
All DBs
Position
1:979065..980012
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AA seq
315 aa
AA seq
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MARRRKGRAINGVLLLDKSTGISSNDILQKVKRLFFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTDTSDSDGDVVETRPVQVDRETLLAKIESFRGETDQ
VPSMFSALKYQGRPLYEYARQGIEVPREARKITVYDIVLHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRTGVAKYPYENMVTLDQLNAMVEDAKREERSPYDVLDALL
LPMDTAVQDLPEVNLVPELVHMVQHGQAVQVFGAPSDCFVRLTGGEEKLFLGVGEMNDDG
KIAPKRLVVYPTDAE
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgtcgtaaaggccgtgcgatcaacggtgtgctgttgctagataagtcaaca
ggcatttcatcgaacgacattttacagaaagtgaaacgcctgtttttcgccgagaaagcc
ggacacaccggtgcgctggatccgctggcaaccggtatgctgccgatttgccttggcgaa
gcgaccaagttctcccagttcctgcttgattccgacaaacgctatcgcgtgattgccaaa
ctaggtgagcgcaccgacacttcagactctgacggtgacgtggtggaaacccgcccggtg
caggtcgaccgcgagactttgttggccaagattgaatcattccgtggcgaaaccgatcag
gtgccatcgatgttttctgcgctgaaatatcaaggacgtccgttgtacgaatacgcacgt
caaggtattgaagtgccacgcgaagcgcgcaaaatcaccgtgtacgacatcgtcctgcat
cgctttgaaggtgatgaagtggaaatggaagtgcactgctcaaaaggcacgtacattcga
accatcgttgacgatttaggcgaaatgctgggctgcggtgcgcatgttacaatgctgcgt
cgcactggtgtggcgaagtacccgtacgaaaacatggtcacattagaccaactcaacgcg
atggtggaagacgccaagcgtgaagagcgttcgccttacgacgtgttggatgcgttgctg
ctgccaatggataccgcagtgcaggatttaccagaagtgaatctggtgcctgaactggtc
cacatggtgcaacacggtcaagcggtgcaagtttttggtgcgccaagtgattgcttcgtt
cgtttgaccggcggagaggagaaactcttcttgggcgtgggtgaaatgaatgacgatggc
aaaattgcgccaaaacgtttggtggtttacccgacagacgctgagtaa
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