Vibrio furnissii: vfu_A01001
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Entry
vfu_A01001 CDS
T01680
Name
(GenBank) c-di-GMP phosphodiesterase A-related protein
KO
K20966
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vfu
Vibrio furnissii
Pathway
vfu05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vfu00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
vfu_A01001
Enzymes [BR:
vfu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
vfu_A01001
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GGDEF_GdpP
HAMP
Glyco_tranf_2_4
Motif
Other DBs
NCBI-ProteinID:
ADT86194
LinkDB
All DBs
Position
1:complement(1042203..1044551)
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AA seq
782 aa
AA seq
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MKLNHRILLLIAPVILLSAAASSYIIYTSQKDALLKRTDSYLQLSMEKLASHFRQTRALV
NSYSFTLAKSDIIRHYFYYEHNPYRELELVDNLHQTISILQPSDSQHVALSILDGDKNIL
YYAENSYDPFAQMDPLVKQFVDQRFNQTARTSDVSYTENSAGEGILVRYDVLDTKTLQTP
LSYNRDEVFFIVVYVVLDKFNALRQHIEFDNQSPIFFQDHPPQNTQRLTQSVELQPGMYA
ILDPAPLLFRDRLARIQKELMLAFGFSALVTVLLLLILLYKHVINPILRLDKQLQEVENK
QRKNIEILNSQDEIGRLSSRFYAMYTELDSTYQRTKTLAEYDHLTKLANRRQFQVQAEKT
LLETPRNSHIWVLYIDLDNFKYVNDKYGHQIGDSLLVSFAEHVRCLCEAFNQQHYTYSLA
ARLSGDEFAIVLCAPSRKADCATQFAQRLLDPMQKQDNSPLGHFPITASIGIATYPEDGQ
QIEKLLLNADTAMYQAKNAGKNQVAYYSQQLDEIVQRRNTIERALRLGHFDQEFSLVYQP
YFTCSGHQVAGFEVLLRWESEQLGDVSPDEFIPIAEQTGLFGQIDRWVIQSAFAELNTLR
EQFTQPIQISINLSSAELDSQHLAQFIHQHAQQHQVVPRWVDFEITETFAADSKSFPLLH
ELSRLGYGLTIDDFGSGYTSIAQLVQYPVQKIKFDRAFLDTLIATNKQKVIKPLIDLCHS
QHMKVTAEGIESETMHQWLANYRCDYMQGYFFGKPMSLSEVCAWQQPNEMTPSYEKSDHC
FS
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaaccatagaatccttctgctgattgcgccggtgattctgctcagtgctgca
gcctccagctatatcatttacaccagccagaaagatgcgttgctgaaacggaccgacagc
tatttgcaattgagcatggaaaagctggccagccatttcaggcaaacgcgcgccttggtc
aacagttactccttcacgctcgccaaaagcgacatcattcgccactacttctactacgaa
cacaatccctaccgcgaattagaactcgtggacaatttgcatcaaaccatcagtattctt
caacccagcgatagtcagcatgttgcgctgtcgatcctcgacggtgacaaaaacattctc
tactacgccgagaacagctacgacccgtttgctcaaatggatccgttggtcaaacagttc
gtcgatcagcggttcaatcaaaccgcgcgtacttccgatgtcagctacaccgaaaactca
gccggtgaaggcatattggtgcgctacgacgtgctggataccaaaacattgcaaacaccg
ctgagctacaaccgcgacgaagtcttttttatcgtggtgtatgtggtgctggataaattt
aacgcgctgcgccaacacattgaatttgataaccaaagccccattttctttcaagaccat
ccaccgcaaaacacgcagcgtctgacgcagagcgtcgagctgcaaccgggcatgtacgcc
attttggaccccgcgccgttgctgtttcgtgaccgcttggcacgcattcaaaaggagctg
atgctggcgtttggtttctcggcactggtcaccgtgttgctgctgctgatcctgctctac
aaacatgtcatcaatccgattcttcgcctcgataagcagctacaagaagttgagaacaaa
cagcgtaagaacattgaaattctgaacagccaagatgaaatcggccgtctctcttcacgc
ttctacgccatgtataccgagctcgacagcacctatcaacgcaccaaaaccttggcggaa
tacgatcacctgaccaagctggccaaccgccgccaatttcaagtgcaagcggaaaaaacc
ttgctggagacgccgcgaaacagccatatctgggtgctgtatatcgatttggataacttc
aaatacgtcaacgacaaatacggccaccagatcggcgactcgctgctggtcagctttgcc
gagcacgtacgctgcttgtgtgaagcgttcaaccagcagcattacacctatagtttggcc
gcgcgtttgtccggcgacgaatttgcgattgtactctgcgcgccaagccgcaaggccgat
tgcgcgactcagtttgcccagcgcctacttgacccgatgcaaaaacaggacaactcgcca
ctgggacactttccaatcaccgccagtatcggcatcgccacttatccagaagatggccag
cagattgaaaaactgttgcttaacgccgacaccgcgatgtatcaagccaagaacgcgggc
aaaaaccaagtggcttactactcccagcagctcgatgagatcgttcagcgccgcaacacg
attgaacgcgcgttgcgcttggggcattttgatcaagaattcagtttggtctatcaaccg
tatttcacctgctcgggccatcaagtcgctgggtttgaagtgctgctgcgttgggagtcc
gaacagttgggcgacgtctcgccggatgaattcattccaattgctgaacaaaccgggttg
tttggccagattgaccgctgggtgattcagtctgcgtttgctgaactcaacacgctgcgc
gaacaatttacccagccgattcaaatctccatcaacctctcgtcggcagagctagattcc
caacacctggcgcagtttatccaccagcatgcgcagcaacaccaagtggtgccgcgctgg
gtcgactttgaaattactgaaacctttgccgccgactccaagagtttcccgctgctgcat
gagctgtcccgcttgggctatggcttgaccattgacgacttcggttcgggctacacctcc
attgcccaactggtgcagtacccagtgcagaaaattaagttcgaccgcgcatttttggat
acactgatcgccaccaacaaacagaaagtcatcaaacccctgattgacttgtgccactcc
cagcacatgaaagtgaccgcggagggcatcgaaagtgaaacaatgcaccagtggctggcg
aattatcgctgcgattacatgcagggatacttctttgggaaacccatgtcactgagcgaa
gtttgtgcctggcaacaaccgaatgagatgaccccgtcctatgaaaaaagtgatcattgc
ttctcttaa
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