Vibrio furnissii: vfu_A01084
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Entry
vfu_A01084 CDS
T01680
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vfu
Vibrio furnissii
Pathway
vfu03030
DNA replication
vfu03430
Mismatch repair
vfu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
vfu_A01084
03430 Mismatch repair
vfu_A01084
03440 Homologous recombination
vfu_A01084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vfu03032
]
vfu_A01084
03400 DNA repair and recombination proteins [BR:
vfu03400
]
vfu_A01084
Enzymes [BR:
vfu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
vfu_A01084
DNA replication proteins [BR:
vfu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
vfu_A01084
DNA repair and recombination proteins [BR:
vfu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
vfu_A01084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ADT86274
LinkDB
All DBs
Position
1:1131168..1134647
Genome browser
AA seq
1159 aa
AA seq
DB search
MSDPKFIHLRIHSDFSMVDGLSKVPPLVKKVAAMGMPAMALTDFTNLCGLVKFYGTAHGC
GVKPIVGADFLVRSEEFGDELTRLTVLAKDNVGYKNLTLLISDAYLRGHVQNQPVIDKEW
LIKYAEGLILLSGAKGGDIGRALLKGNQALVEKCVAFYQTHFTDNFYLELVRTGRADEEN
YLHFALDLAEQAELPVVATNDVVFIDPDQFDAHEIRVAIHDGYTLEDPRRPKNYSAQQYL
RSEEEMCELFADIPEALENSVEIAKRCNVTVRLGEYFLPAFPTEGMEETEFLVKKSHEGL
EERLEFLFPDPAVRAERRPAYDERLEIELKVINQMGFPGYFLIVMEFIQWSKDNDIPVGP
GRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDKRDQVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPFGFVDRISKMIPPDPGMTLEKAFKAEPA
LQELYDADEEVKELIDMCRILEGCTRNAGKHAGGVVISPTAITDFAPIYCDSEGHHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALGLINPRREKAGEPPVRIESIPLVDPASFRML
QNSETTAVFQLESRGMKELIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDEKWQHESLKEILEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKKPEEM
AKQRAVFQSGAENNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
EFMAAVMTADMDNTEKVVGLVDECMRMGLTVLPPDINSGLYRFNVDDTGAIVYGIGAIKG
VGEGPIEVILEARNKGGYFKDLFDFCARIDIKKVNKRVIEKLILAGALDRLGPHRAAMMA
SLDDAVKAASQHHQAEAFGQADMFGVLTDAPEEVERKYIQVPEWPEKVWLEGERETLGLY
LTGHPINAYLKELNKYTSCRLNEAMPTRRDQSLTVAGLVIAARVMTTKRGNRIGLMTLDD
RSGRMEVMLFSDALDRYAELLEKDKILVISGQVSFDDFNGGLKMSAREVMDLGSAREKYA
RGLSISIEQSQVDEQFFERFSQILEPHRAGTVPVNVYYQRPDARARLTLGTEWRVTPSDT
LLDELKQLLGNDQVELEFN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacccgaagtttatccacttacgcattcacagtgatttttccatggttgacggc
ttgtcaaaagtgccgccactggtgaagaaagtggccgcgatgggcatgccagcaatggcg
ctgacagattttaccaacctctgtggcttggtgaagttctacggcacggcacacggctgc
ggcgttaagccgattgttggcgctgactttcttgtgcgttcggaagagtttggcgatgag
ttgactcggctcaccgtgttggcgaaagacaatgttgggtacaaaaatctcacgttgctg
atttcagatgcctacctgcgtgggcacgtgcagaaccaacctgtgatcgacaaagagtgg
ttgattaaatacgccgaaggtttgattctcctgtccggcgccaaaggcggcgacattggc
cgtgcgttgctcaaaggcaaccaagcgctggtggaaaaatgcgtggcgttctaccaaacc
catttcactgacaacttttaccttgaattggttcgtaccggccgcgccgacgaagagaat
tacctgcactttgctttagatctggctgaacaagccgaattgccggtggtcgcgaccaac
gatgtggtctttattgaccccgaccaattcgatgctcacgaaattcgcgtcgccattcac
gacggttatacgctggaagatccgcgtcgtccgaaaaactacagcgcgcagcagtacctt
cgtagcgaagaggaaatgtgcgagctgtttgccgacattccggaagcactcgaaaacagc
gtcgagatcgcgaagcggtgtaacgtgactgtgcgtttgggcgaatacttcctgcccgcg
ttcccaactgaagggatggaagaaaccgagtttctggtcaagaaatctcacgaaggctta
gaagagcgcctagaatttttgttccccgatccggcggtgcgcgctgagcgtcgcccggct
tacgatgagcgtctggaaattgagctcaaagtgatcaaccagatgggctttccgggctac
ttcctgatcgtcatggagttcattcagtggtccaaagataacgacattcccgtggggcct
ggccgggggtcaggtgcgggttccttggttgcgtacgcgctgaaaatcaccgaccttgat
ccgctggaatacgatctgctattcgaacgtttcctgaacccggaacgggtatcgatgccc
gatttcgacgtcgacttctgtatggataaacgcgatcaggtgattgatcacgtggcggag
atgtatggtcgcgacgcggtatcgcagatcatcacgttcggtaccatggcggccaaagcc
gttattcgtgacgtgggccgtgtgttggggcatccgtttggtttcgtcgaccgtatttcg
aaaatgatcccacccgatccgggtatgacgctggaaaaagcgttcaaagcggaacctgcg
ctacaagaactgtacgacgcagacgaagaagtgaaagaactgatcgacatgtgtcgcatt
ctggaagggtgtacgcgaaacgccggtaagcacgcgggtggggtggtgatctcgccaacg
gcgatcaccgattttgcgcccatctactgtgactccgaaggccaccatccggtgacgcag
ttcgataagaacgacgtggaatacgctggtctggtgaagtttgacttcttggggctgcga
acgctgaccatcatcgactgggcattgggtttgattaacccgcgccgtgaaaaagccggt
gaaccgcccgtgcgaattgaatcgattcctttagtggatccggcctcattccgcatgctg
caaaactcggaaaccaccgcggtgttccagcttgaatcgcgaggcatgaaagagttgatc
aaacgtctgcaacccgactgttttgaagacatcatcgccttggtggccctgttccgtccg
ggcccgctgcaatcgggcatggtggacaactttatcgaccgtaaacacggccgagaagcg
atttcttacccggatgaaaagtggcagcacgagtcactgaaagagattttggagccgacc
tacggcatcattctctatcaggaacaggttatgcagatcgctcaggtgctggcgggctat
acgctcggcggagcggacatgctgcgtcgtgcgatgggtaagaaaaaaccagaagagatg
gccaagcagcgtgccgtcttccagtctggcgccgaaaacaacggtgttgacggcgaactg
gcgatgaaaatcttcgatctggtagagaaatttgctggatatggctttaacaaatcgcac
tcagcagcctatgctttagtatcgtaccaaaccctgtggctgaaaacgcacttcccggcg
gaattcatggcggcggtgatgacggcggatatggacaacaccgagaaagtggtgggcctt
gtcgatgaatgcatgcgcatggggctaactgtgttgccgccagatattaactcgggactg
taccgatttaacgtcgatgacacgggcgccattgtgtacgggatcggcgcgatcaaaggg
gtgggtgaaggcccgattgaagtgattcttgaagcgcgcaacaaaggcggctacttcaaa
gacctgtttgatttctgcgcgcgcattgacattaagaaagtcaacaaacgtgtgattgaa
aagctgattttagctggcgcactggatcgcttggggccgcaccgtgcagcgatgatggcg
tcacttgatgatgcggtgaaagctgccagtcagcaccatcaggcggaagcgtttggtcaa
gcagacatgtttggcgtgttgactgatgcgccggaagaagttgaacgaaaatacattcag
gttcctgagtggccggagaaggtctggttggaaggggagcgcgaaacgctcggcctttac
ttgaccgggcacccgattaacgcctatctcaaggaactcaataagtacaccagttgtcga
ttgaatgaagccatgccgacgcgtcgcgatcaatcgctaactgtggctgggttggtgatt
gccgcccgcgtgatgaccaccaagcggggaaaccgcatcgggttgatgacgctggatgac
cgcagcggccgaatggaagtgatgctgttttctgatgcgctggatcggtatgcagaattg
ttagaaaaagataaaattctggtgatttccggacaggtcagctttgatgacttcaatggt
ggccttaaaatgtcggcgcgcgaagtcatggacttgggcagtgcgcgtgaaaaatatgcc
cgtggtttatcgatctcgattgaacagtcacaggttgatgaacagttttttgagcgcttt
agtcagatcttagagcctcaccgagcagggactgtccctgtcaatgtatactaccagcgc
cccgatgcgcgtgcgcgcctgacgttaggcactgaatggcgtgtgactccaagcgataca
ttgttagacgaattaaaacagctacttggcaatgaccaggtagaacttgaatttaactaa
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