Vibrio furnissii: vfu_A01186
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Entry
vfu_A01186 CDS
T01680
Name
(GenBank) sigma-54 dependent transcriptional activator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
vfu
Vibrio furnissii
Pathway
vfu02020
Two-component system
vfu02040
Flagellar assembly
vfu05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vfu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
vfu_A01186
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
vfu_A01186
09142 Cell motility
02040 Flagellar assembly
vfu_A01186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vfu03000
]
vfu_A01186
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vfu02035
]
vfu_A01186
Transcription factors [BR:
vfu03000
]
Prokaryotic type
Helix-turn-helix
Other families
vfu_A01186
Bacterial motility proteins [BR:
vfu02035
]
Flagellar system
Flagellar assembly proteins
Others
vfu_A01186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
AAA_5
AAA_16
HTH_50
Mg_chelatase
bpMoxR
AAA
MCM
AAA_7
AAA_2
CUE
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ADT86372
LinkDB
All DBs
Position
1:1236720..1238090
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AA seq
456 aa
AA seq
DB search
MIESSQLDQIDWSAVWAGCILGSIQSQALPESLSESLSKANHIPLLMANKQPYSLEEFPQ
FVGELDFPLNYPQLSEALRHCKEFLGRKGIHVLATARKNTLFRSLVGQSHGIQEVRHLIE
QVSGTEANVLILGESGTGKEVVARNIHYHSSRRNGPFVPINCGAIPAELLESELFGHEKG
AFTGAITSRKGRFELAEGGTLFLDEIGDMPMSMQVKLLRVLQERCFERVGGNTTIKANVR
VIAATHRHLETMIEDQRFREDLYYRLNVFPIEMPALKERKEDIPLLLQELMTRLEAEGGL
PICFTPRSINSLMEHDWPGNVRELANLVERMVILYPNSLVDVNHLPTKYRYSDIPEFQPE
PSRFSSVEEQERDVLSDIFSEEFSFDQEEELNGRLDAPQSLPPEGVNLKELLADLEVNLI
NQALEAQGGVVARAADMLGMRRTTLVEKMRKYNMQR
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
gtgattgagtcttctcagttggatcagattgactggtctgctgtgtgggctggatgcatt
cttggttcgattcaatctcaggcgttgcctgagtcactatctgagtctctttcaaaggcc
aatcacattccacttttaatggcgaataagcagccatactctctggaagaattcccgcag
tttgtgggtgagttggattttccgctcaattacccgcagctgagcgaagcattgagacac
tgcaaagaattcttagggcgtaaaggcattcacgtgctggcaaccgcccgcaaaaacacc
ttatttcgtagtctggtcggtcagagccacggcattcaagaagtgcgtcatttgattgaa
caagtgtccgggacggaagcgaacgtgctgattctgggtgaatcgggcacgggtaaagaa
gtcgttgcgcgcaatattcactatcactcttctcgtcgcaatgggccatttgtgccgatc
aactgtggcgcgattccggccgagttgctggaaagtgagctgtttggacacgaaaaaggc
gcgtttacgggcgcgatcacgtcacgcaaaggtcggtttgaactggctgagggtggcacg
ctgtttttggatgaaatcggtgacatgccgatgagcatgcaggtcaaactgctgcgagtg
ctgcaagagcgttgctttgaacgtgtcggtggcaacaccaccatcaaagccaatgtccgc
gtgattgccgcgacgcaccgccatctggaaaccatgatcgaagaccaacgtttccgcgaa
gatctctactaccgcctcaacgtgttcccgattgaaatgccagcgctgaaagagcgtaaa
gaagacattccgttgttgctacaagagctgatgacgcgcttggaagcggaaggcgggttg
ccgatttgctttacgccacgttcgattaactcgttgatggaacatgattggccgggtaat
gtgcgtgaattggcaaaccttgtcgagcgcatggtgatcttgtatccgaatagcttggtc
gatgtgaaccatctgccaaccaagtaccgttacagcgacattcccgaattccaacccgag
ccgagccgtttcagctccgttgaagagcaagaacgcgacgtgctgtcggatatcttctcg
gaagaattcagtttcgatcaggaagaagagctcaatggtcgtttggatgcgccgcagtcg
ttaccaccggaaggggtcaacctgaaagagctgttggctgacttggaagtgaacctgatt
aatcaggcgttagaagcgcaaggcggtgtcgtcgctcgcgccgcagacatgctgggtatg
cgccgcacgacactggttgaaaagatgcgcaaatacaatatgcaacgttga
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