KEGG   Vibrio furnissii: vfu_A01253
Entry
vfu_A01253        CDS       T01680                                 
Name
(GenBank) RNA polymerase sigma factor for flagellar operon
  KO
K02405  RNA polymerase sigma factor FliA
Organism
vfu  Vibrio furnissii
Pathway
vfu02020  Two-component system
vfu02040  Flagellar assembly
vfu05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vfu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    vfu_A01253
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    vfu_A01253
  09142 Cell motility
   02040 Flagellar assembly
    vfu_A01253
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:vfu03021]
    vfu_A01253
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:vfu02035]
    vfu_A01253
Transcription machinery [BR:vfu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     vfu_A01253
Bacterial motility proteins [BR:vfu02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    vfu_A01253
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r3 Sigma70_r2 Sigma70_r4_2 HTH_23 HTH_10 UPF0122 GerE Rv2175c_wHTH MarR_2 HTH_24 HTH_28 KORA PhyR_sigma-like WH_1 Phage_terminase
Other DBs
NCBI-ProteinID: ADT86438
LinkDB
Position
1:1306716..1307450
AA seq 244 aa
MNKALTYDQYGNMNSQKLFLDKYSVLVKRIAHHLIGRLPPSVLIEDLIQAGMVGLLEAQK
NYDGSKGASFETYAGIRIRGAMLDDIRRGDWVPRSVHKHNREIGQAIAVLEGELNRDPTD
SEVAKHLGMSLDQYHSVLTDINCSRIVGIEDLGVTDDAISPVDDDEDNSPFKGVADESFR
KALVESIKSLPEREALVLSLYYDEELNLKEIGEVLGVSESRVSQILSQAMQRLRTKLSSW
TQND
NT seq 735 nt   +upstreamnt  +downstreamnt
gtgaataaagcgcttacttatgatcagtacggcaatatgaatagccagaaattgtttctg
gataaatattccgtgctggttaagcgtatagctcatcatttaatcgggcgtttacctccc
agtgtccttattgaagatttaatacaagccggcatggtcggcttgcttgaagcacagaag
aactacgacggaagtaaaggtgcgagttttgaaacctacgccggaattcgtattcggggc
gcaatgctcgacgatattcgacgtggtgactgggtgccacgatcggtgcacaagcacaat
cgtgaaatcggtcaggcaattgcagtgttggaaggagagctgaatcgcgatccgaccgac
agtgaagtcgcaaaacatctgggtatgtcgttagatcaatatcatagcgtgttaaccgac
ataaactgttcacgaattgtcggaattgaagacttaggtgtgacagacgatgccatttcg
ccagtggatgacgatgaagacaattcaccctttaaaggtgtggcagacgaatcgttccgc
aaagcattggttgagtcaataaaatcacttcctgagcgtgaagctttagtactttcgctc
tattatgatgaagagctaaacttgaaagaaattggtgaagtacttggcgtgagtgagtcc
cgcgtgagccaaatactgagccaagcaatgcaacgtctgagaaccaaattgagctcttgg
acacaaaacgactaa

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