Vibrio furnissii: vfu_A02351
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Entry
vfu_A02351 CDS
T01680
Name
(GenBank) Holliday junction DNA helicase B
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
vfu
Vibrio furnissii
Pathway
vfu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vfu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
vfu_A02351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vfu03400
]
vfu_A02351
Enzymes [BR:
vfu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
vfu_A02351
DNA repair and recombination proteins [BR:
vfu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
vfu_A02351
RecFOR pathway proteins
vfu_A02351
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
Mg_chelatase
nSTAND3
AAA_22
AAA_14
AAA_3
NTPase_1
Rad17
Bac_DnaA
RNA_helicase
TIP49
AAA_18
AAA_2
TniB
DUF815
ABC_tran
NB-ARC
AAA_17
AAA_24
Sigma54_activ_2
AAA_PrkA
NPHP3_N
AAA_28
AAA_19
TsaE
ATP-synt_ab
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
ADT87482
LinkDB
All DBs
Position
1:complement(2440326..2441330)
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLIAPTNPSFKDEEVIDRAIRPKKLADYRGQDHVRDQMEIFIQAAQKRSEALDHL
LIFGPPGLGKTTLANIVANEMEVSIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRL
SPMVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIV
QRLEYYKVADLQHIVQRSADCLGLSMDAEGALEVARRARGTPRIANRLLRRVRDFAEVKG
NGHICADIADKALNMLDVDHQGFDYMDRKLLLAIMEKFGGGPVGLDNLAAAIGEEKDTIE
DVIEPFLIQQGYLQRTPRGRIATDRAYLHFGLEK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagccgatcgccttattgctccgaccaacccttcatttaaagatgaagaggtg
atcgatcgtgcgattcgtccgaagaagctggccgattaccgaggtcaggatcacgtccgt
gatcagatggaaatttttattcaagcggcgcaaaaacgcagcgaagcacttgaccatttg
ctgatctttgggccgccggggttggggaaaaccaccctcgctaatattgttgccaatgag
atggaagtgagcattcgcaccacgtcaggcccagtgttggaaaaagcgggcgatctcgct
gcgctgctgaccaacttggaagagaacgatgtgctgttcatcgatgaaattcaccgtctc
agccctatggtggaagaggttctctatccggcgatggaagattatcagctggacattatg
attggtgaaggaccagctgcgcgttccatcaaaattgatttgccaccctttaccttgatt
ggggccacaacccgcgctgggtcgttaacctcgccgctgcgcgaccgtttcggcattgtg
cagcgtcttgaatactataaagtggctgacctgcaacacattgtgcagcgcagtgcggac
tgccttggcctctctatggacgctgaaggggcgctggaagtggcgcgtcgcgctcgcggt
acaccccgtattgccaaccgcctgctgcgccgagtgcgtgattttgcagaagtgaagggc
aatggtcatatttgtgctgatatcgcagataaagcgcttaatatgctggatgtggaccat
caagggtttgattacatggaccgtaagttgctactggccattatggagaaatttggtggg
ggaccggttggcctcgataacttggctgctgcgattggtgaagagaaagatacgattgaa
gatgtgatcgaaccgtttctcattcagcagggttatttgcaacgaacgcctcgcggccgg
attgcgaccgatcgcgcctacttgcattttggtttagaaaaataa
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